| Protein: | PTP2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 750 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTP2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..750] | [1..750] |
|
|
0.0 | [146..738] | [1132..1649] |
|
Region A: Residues: [1-200] |
1 11 21 31 41 51
| | | | | |
1 MDRIAQQYRN GKRDNNGNRM ASSAISEKGH IQVNQTRTPG QMPVYRGETI NLSNLPQNQI 60
61 KPCKDLDDVN IRRNNSNRHS KILLLDLCAG PNTNSFLGNT NAKDITVLSL PLPSTLVKRS 120
121 NYPFENLLKN YLGSDEKYIE FTKIIKDYDI FIFSDSFSRI SSCLKTTFCL IEKFKKFICH 180
181 FFPSPYLKFF LLEGSLNDSK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [201-750] |
1 11 21 31 41 51
| | | | | |
1 APSLGKNKKN CILPKLDLNL NVNLTSRSTL NLRINIPPPN DSNKIFLQSL KKDLIHYSPN 60
61 SLQKFFQFNM PADLAPNDTI LPNWLKFCSV KENEKVILKK LFNNFETLEN FEMQRLEKCL 120
121 KFKKKPLHQK QLSQKQRGPQ STDDSKLYSL TSLQRQYKSS LKSNIQKNQK LKLIIPKNNT 180
181 SSSPSPLSSD DTIMSPINDY ELTEGIQSFT KNRYSNILPY EHSRVKLPHS PKPPAVSEAS 240
241 TTETKTDKSY PMCPVDAKNH SCKPNDYINA NYLKLTQINP DFKYIATQAP LPSTMDDFWK 300
301 VITLNKVKVI ISLNSDDELN LRKWDIYWNN LSYSNHTIKL QNTWENICNI NGCVLRVFQV 360
361 KKTAPQNDNI SQDCDLPHNG DLTSITMAVS EPFIVYQLQY KNWLDSCGVD MNDIIKLHKV 420
421 KNSLLFNPQS FITSLEKDVC KPDLIDDNNS ELHLDTANSS PLLVHCSAGC GRTGVFVTLD 480
481 FLLSILSPTT NHSNKIDVWN MTQDLIFIIV NELRKQRISM VQNLTQYIAC YEALLNYFAL 540
541 QKQIKNALPC
|
| Detection Method: | |
| Confidence: | 300.9691 |
| Match: | 1larA_ |
| Description: | RPTP Lar |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [253-750] |
1 11 21 31 41 51
| | | | | |
1 DLIHYSPNSL QKFFQFNMPA DLAPNDTILP NWLKFCSVKE NEKVILKKLF NNFETLENFE 60
61 MQRLEKCLKF KKKPLHQKQL SQKQRGPQST DDSKLYSLTS LQRQYKSSLK SNIQKNQKLK 120
121 LIIPKNNTSS SPSPLSSDDT IMSPINDYEL TEGIQSFTKN RYSNILPYEH SRVKLPHSPK 180
181 PPAVSEASTT ETKTDKSYPM CPVDAKNHSC KPNDYINANY LKLTQINPDF KYIATQAPLP 240
241 STMDDFWKVI TLNKVKVIIS LNSDDELNLR KWDIYWNNLS YSNHTIKLQN TWENICNING 300
301 CVLRVFQVKK TAPQNDNISQ DCDLPHNGDL TSITMAVSEP FIVYQLQYKN WLDSCGVDMN 360
361 DIIKLHKVKN SLLFNPQSFI TSLEKDVCKP DLIDDNNSEL HLDTANSSPL LVHCSAGCGR 420
421 TGVFVTLDFL LSILSPTTNH SNKIDVWNMT QDLIFIIVNE LRKQRISMVQ NLTQYIACYE 480
481 ALLNYFALQK QIKNALPC
|
| Detection Method: | |
| Confidence: | 117.0 |
| Match: | 1larA |
| Description: | RPTP Lar |
| Matching Structure (courtesy of the PDB): |
|
