| Protein: | LAS17 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 633 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LAS17.
| Description | E-value | Query Range |
Subject Range |
|
|
3.0E-47 | [58..628] | [101..672] |
|
|
9.0E-46 | [59..630] | [196..777] |
|
|
6.0E-45 | [121..630] | [595..1111] |
|
|
2.0E-42 | [77..612] | [813..1367] |
|
|
4.0E-42 | [58..627] | [235..821] |
|
|
8.0E-42 | [1..633] | [1..633] |
|
|
6.0E-41 | [87..631] | [71..613] |
|
|
6.0E-41 | [87..631] | [71..613] |
|
Region A: Residues: [1-154] |
1 11 21 31 41 51
| | | | | |
1 MGLLNSSDKE IIKRALPKAS NKIIDVTVAR LYIAYPDKNE WQYTGLSGAL ALVDDLVGNT 60
61 FFLKLVDING HRGVIWDQEL YVNFEYYQDR TFFHTFEMEE CFAGLLFVDI NEASHFLKRV 120
121 QKRERYANRK TLLNKNAVAL TKKVREEQKS QVVH
|
| Detection Method: |  |
| Confidence: | 49.455932 |
| Match: | PF00568 |
| Description: | WH1 domain |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [155-426] |
1 11 21 31 41 51
| | | | | |
1 GPRGESLIDN QRKRYNYEDV DTIPTTKHKA PPPPPPTAET FDSDQTSSFS DINSTTASAP 60
61 TTPAPALPPA SPEVRKEETH PKHSLPPLPN QFAPLPDPPQ HNSPPQNNAP SQPQSNPFPF 120
121 PIPEIPSTQS ATNPFPFPVP QQQFNQAPSM GIPQQNRPLP QLPNRNNRPV PPPPPMRTTT 180
181 EGSGVRLPAP PPPPRRGPAP PPPPHRHVTS NTLNSAGGNS LLPQATGRRG PAPPPPPRAS 240
241 RPTPNVTMQQ NPQQYNNSNR PFGYQTNSNM SS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [427-633] |
1 11 21 31 41 51
| | | | | |
1 PPPPPVTTFN TLTPQMTAAT GQPAVPLPQN TQAPSQATNV PVAPPPPPAS LGQSQIPQSA 60
61 PSAPIPPTLP STTSAAPPPP PAFLTQQPQS GGAPAPPPPP QMPATSTSGG GSFAETTGDA 120
121 GRDALLASIR GAGGIGALRK VDKSQLDKPS VLLQEARGES ASPPAAAGNG GTPGGPPASL 180
181 ADALAAALNK RKTKVGAHDD MDNGDDW
|
| Detection Method: | |
| Confidence: | 11.97 |
| Match: | 1deqA |
| Description: | Fibrinogen |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [525-633] |
1 11 21 31 41 51
| | | | | |
1 PPQMPATSTS GGGSFAETTG DAGRDALLAS IRGAGGIGAL RKVDKSQLDK PSVLLQEARG 60
61 ESASPPAAAG NGGTPGGPPA SLADALAAAL NKRKTKVGAH DDMDNGDDW
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
