| Protein: | SEY1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 776 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SEY1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..776] | [1..776] |
|
|
0.0 | [6..767] | [28..789] |
|
|
0.0 | [7..759] | [27..821] |
|
|
0.0 | [1..714] | [1..710] |
|
|
0.0 | [7..765] | [23..831] |
|
|
0.0 | [2..748] | [5..724] |
|
|
3.0E-77 | [424..725] | [6..302] |
|
Region A: Residues: [1-148] |
1 11 21 31 41 51
| | | | | |
1 MADRPAIQLI DEEKEFHQSA LQYFQQCIGN RDVGLDYHVI SVFGSQSSGK STLLNVLFNT 60
61 NFDTMDAQVK RQQTTKGIWL AHTKQVNTTI EIDNDRPDIF VLDVEGSDGS ERGEDQDFER 120
121 KAALFAIAVS EVLIVNMWEQ QIGLYQGN
|
| Detection Method: |  |
| Confidence: | 2.154902 |
| Match: | 1dg3A_ |
| Description: | Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [149-283] |
1 11 21 31 41 51
| | | | | |
1 NMALLKTVFE VNLSLFGKND NDHKVLLLFV IRDHVGVTPL SSLSDSVTRE LEKIWTELSK 60
61 PAGCEGSSLY DYFDLKFVGL AHKLLQEDKF TQDVKKLGDS FVMKGTENYY FKPQYHHRLP 120
121 LDGWTMYAEN CWDQI
|
| Detection Method: | |
| Confidence: | 8.39 |
| Match: | 1n1bA |
| Description: | (+)-bornyl diphosphate synthase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [284-633] |
1 11 21 31 41 51
| | | | | |
1 ERNKDLDLPT QQILVARFKT EEISNEALEE FISKYDESIA PLKGNLGSLT SQLVKLKEEC 60
61 LTKYDEQASR YARNVYMEKR EALNTKLNSH ISGTINEFLE SLMEKLWDDL KLEVSSRDKA 120
121 TTSFVESVAA GKSKIEKEFN ESMETFKKLG LLISNEEITC KFSDDIEERI KQLRDAELKA 180
181 KIGRIKKNLV PELKDHVIHL LSHPSKKVWD DIMNDFESTI KDNISAYQVE KDKYDFKIGL 240
241 SESENAKIYK NIRILAWRTL DTTVHDYLKI DTIVSILRDR FEDVFRYDAE GSPRLWKTEE 300
301 EIDGAFRVAK EHALEVFEVL SLAVTSDNVE IIPDVPMAEE ESGEDNEIYR
|
| Detection Method: | |
| Confidence: | 8.39 |
| Match: | 1n1bA |
| Description: | (+)-bornyl diphosphate synthase |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [634-776] |
1 11 21 31 41 51
| | | | | |
1 DNEGVFHSRR FAHILTELQK ENVLDQFRRQ INITVLDSKR SIITTRTHIP PWIYVLLAVL 60
61 GWNEFVAVIR NPLFVTLTLI LGATFFVIHK FGLWGPVVNV VQSAVGETRT AIKDKLRQFV 120
121 VEDHEVKESF EMKDFSKNEQ KEK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.295 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.303 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.577 | a.63.1 | Apolipophorin-III |
| View | Download | 0.304 | a.24.14 | FAT domain of focal adhesion kinase |
| View | Download | 0.328 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.285 | a.2.7 | tRNA-binding arm |
| View | Download | 0.284 | f.1.3 | delta-Endotoxin (insectocide), N-terminal domain |
| View | Download | 0.253 | a.74.1 | Cyclin-like |
| View | Download | 0.241 | a.26.1 | 4-helical cytokines |
| View | Download | 0.237 | c.30.1 | PreATP-grasp domain |
| View | Download | 0.228 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.218 | f.32.1 | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.215 | a.168.1 | GEF domain of SopE toxin |
| View | Download | 0.210 | a.47.2 | t-snare proteins |
| View | Download | 0.206 | f.13.1 | Family A G protein-coupled receptor-like |
