Protein: | PNS1 |
Organism: | Saccharomyces cerevisiae |
Length: | 539 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PNS1.
Description | E-value | Query Range |
Subject Range |
|
639.0 | [0..1] | [539..1] |
|
450.0 | [0..117] | [536..404] |
|
450.0 | [0..117] | [536..434] |
|
448.0 | [0..11] | [539..14] |
|
442.0 | [0..111] | [535..191] |
|
440.0 | [0..111] | [536..195] |
Region A: Residues: [1-257] |
1 11 21 31 41 51 | | | | | | 1 MPLNEKYERP PQPPPAYDPN HRPPSSSENS AAANVNDGQT PYHFRQDQYY NLNSKTSGAP 60 61 IGSFDEAFPT ENDNKPRWND WPFTIFFLCT VGGFIAIAAI TLRAWSQTYS STGSGIYDGV 120 121 NTGTLNTNAA ILLVFVCIIA LVFSVLGLTL CRIFPKQFIY CGMVINLVAS LGTAIMYMSL 180 181 RYWSAGIVFL VFTFMTAWCY WGMRSRIPLS VAVLKVVVDA MKKCPQIFFV SFVGALVASA 240 241 FGFLFSAVIV ATYIKYD |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [258-368] |
1 11 21 31 41 51 | | | | | | 1 PNSSNGGCDV SGGSCSHSKL IGVLVVVFFC GYYISEVIRN VIHCVISGVF GSWYYMSKSD 60 61 QGMPRWPAFG ALKRAMTYSF GSICFGSLLV ALIDLLRQIL QMIRHDVTSS G |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.921 | N/A | N/A | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
View | Download | 0.852 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
View | Download | 0.827 | N/A | N/A | a.2.14 | Description not found. |
View | Download | 0.821 | N/A | N/A | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
View | Download | 0.787 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
View | Download | 0.785 | N/A | N/A | a.8.4 | Description not found. |
View | Download | 0.775 | N/A | N/A | a.25.4 | Description not found. |
View | Download | 0.768 | N/A | N/A | a.2.7 | tRNA-binding arm |
View | Download | 0.742 | N/A | N/A | a.2.7 | tRNA-binding arm |
Region A: Residues: [369-539] |
1 11 21 31 41 51 | | | | | | 1 GGQIAIQILF MVFDWIIGFL KWLAEYFNHY AYSFIALYGK PYLRAAKETW YMLREKGMDA 60 61 LINDNLINIA LGLFSMFASY MTALFTFLYL RFTSPQYNSN GAYNGALMAF SFVIALQICN 120 121 IATEAIRSGT ATFFVALGND PEVFHHSYPH RFDEIFRAYP DVLRKLSHQN V |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.