| Protein: | NFI1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 726 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NFI1.
| Description | E-value | Query Range |
Subject Range |
|
|
569.0 | [0..29] | [515..69] |
|
|
557.0 | [0..35] | [515..3] |
|
|
551.0 | [0..35] | [515..3] |
|
|
550.0 | [0..35] | [515..3] |
|
|
549.0 | [0..35] | [515..3] |
|
|
546.0 | [0..42] | [515..1] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MASVMSNNNN NNNNNNASYM FTNPLSNTGG GLINEIKDAI NEMEQLKVLE LKQICKSLDL 60
61 SITGKKAVLQ DRIKQFLRKS CDIGHIDPWR PKAIKI
|
| Detection Method: |  |
| Confidence: | 12.154902 |
| Match: | PF02037 |
| Description: | SAP domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [97-325] |
1 11 21 31 41 51
| | | | | |
1 LIAKVRINSS LPKYSTLWET LKTGAFKHPV ASGQLPVTAL QSTALPPYSQ QQALAYSFTS 60
61 PFYKPIVQIP DANKKLKQSA GRGCTKMKFK VSKSNHDLLK SNKSYKLYLF SGFSIPFIYE 120
121 TVGHEAIDFP YPCELVFNGT KLEDNVKGLK KQNGTGNPAN LTPYLKVPTE MNHLDLHYLN 180
181 IDKEYSISCF IVEVFSPEAL LGKILKRPKI IKQATTAYIK RTLNEQDDD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [326-387] |
1 11 21 31 41 51
| | | | | |
1 DIITTSTVLS LQCPISCTRM KYPAKTDQCK HIQCFDALWF LHSQSQVPTW QCPICQHPIK 60
61 FD
|
| Detection Method: | |
| Confidence: | 34.080922 |
| Match: | PF02891 |
| Description: | MIZ zinc finger |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.842 | N/A | N/A | d.15.7 | Immunoglobulin-binding domains |
|
Region A: Residues: [388-726] |
1 11 21 31 41 51
| | | | | |
1 QLKISEFVDN IIQNCNEDVE QVEISVDGSW KPIHNSSAVI TDTVNQNHSV KNENQGTVKQ 60
61 EQDYDSRNAF DTNLRNGSNH NEPEIISLDS SDDEAFIPAS KSFPTHVNPR NDQLRADIFP 120
121 SESEGSSDYN PNHTSTPKGS PTMDQDNYQD AFQMRSFLNQ GATTNINDTP TNNSSINSFV 180
181 TATNGDSRIF YNRGPSTPLL PAVLQNLTNQ TEAQRNPYGP NYNTTAQDRN LLGIEGDLPP 240
241 IPPVDPNSEA ETELPTRTTS AAHLPPYIHV STSGHGDDGK IRKRRHSNVS IYIPKNPYAT 300
301 LMKRRPQANH AIMNKTLAQT NDFNTSAQDN SEVVDLTSD
|
| Detection Method: | |
| Confidence: | 12.93 |
| Match: | |
| Description: | No description for 1i3qA was found. |
