| Protein: | SFL1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 766 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SFL1.
| Description | E-value | Query Range |
Subject Range |
|
|
270.0 | [0..60] | [324..16] |
|
|
270.0 | [0..58] | [313..3] |
|
|
270.0 | [0..58] | [313..68] |
|
|
268.0 | [0..58] | [313..3] |
|
|
265.0 | [0..31] | [326..3] |
|
|
265.0 | [0..58] | [313..3] |
|
|
265.0 | [0..31] | [324..7] |
|
Region A: Residues: [1-176] |
1 11 21 31 41 51
| | | | | |
1 MSEEETVSAP APASTPAPAG TDVGSGGAAA GIANAGAEGG DGAEDVKKHG SKMLVGPRPP 60
61 QNAIFIHKLY QILEDESLHD LIWWTPSGLS FMIKPVERFS KALATYFKHT NITSFVRQLN 120
121 IYGFHKVSHD HSSNDANSGD DANTNDDSNT HDDNSGNKNS SGDENTGGGV QEKEKS
|
| Detection Method: |  |
| Confidence: | 144.325697 |
| Match: | 1hksA |
| Description: | SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF DROSOPHILA HEAT SHOCK TRANSCRIPTION FACTOR |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [177-294] |
1 11 21 31 41 51
| | | | | |
1 NPTKIWEFKH SSGIFKKGDI EGLKHIKRRA SSRNNSSINS RKNSSNQNYD IDSGARVRPS 60
61 SIQDPSTSSN SFGNFVPQIP GANNSIPEYF NNSHVTYENA NHAPLESNNP EMQEQNRP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [295-370] |
1 11 21 31 41 51
| | | | | |
1 PNFQDETLKH LKEINFDMVK IIESMQHFIS LQHSFCSQSF TFKNVSKKKS ENIVKDHQKQ 60
61 LQAFESDMLT FKQHVM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.883 | a.2.15 | Description not found. |
|
Region A: Residues: [371-538] |
1 11 21 31 41 51
| | | | | |
1 SRAHRTIDSL CAVNAAATAA SVAPAPAPTS TSAYAPKSQY EMMVPPGNQY VPQKSSSTTN 60
61 IPSRFNTASV PPSQLLYNTN RSRNQHVTYA SEPAHVPNFI NQPIPIQQLP PQYADTFSTP 120
121 QMMHNPFASK NNNKPGNTKR TNSVLMDPLT PAASVGVQGP LNYPIMNI
|
| Detection Method: | |
| Confidence: | 14.81 |
| Match: | |
| Description: | No description for 1ldvA was found. |
|
Region A: Residues: [539-607] |
1 11 21 31 41 51
| | | | | |
1 NPSVRDYNKP VPQNMAPSPI YPINEPTTRL YSQPKMRSLG STSSLPNDRR NSPLKLTPRS 60
61 SLNEDSLYP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [608-766] |
1 11 21 31 41 51
| | | | | |
1 KPRNSLKSSI SGTSLSSSFT LVANNPAPIR YSQQGLLRSL NKAANCAPDS VTPLDSSVLT 60
61 GPPPKNMDNL PAVSSNLINS PMNVEHSSSL SQAEPAPQIE LPQPSLPTTS TTKNTGEADN 120
121 SKRKGSGVYS LLNQEDSSTS SADPKTEDKA APALKKVKM
|
| Detection Method: | |
| Confidence: | 11.0 |
| Match: | |
| Description: | No description for 1deqA was found. |
