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View Structure Prediction Details

Protein: YOR139C
Organism: Saccharomyces cerevisiae
Length: 130 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YOR139C.

Predicted Domain #1
Region A:
Residues: [1-130]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNCLTKLVI LVCLKYVAKA LLNRSTGLIM KDKPEGVHHI KSCSDSSSRI WYSLWMNIAF  60
   61 CGGLGPTSIF DPCFLTSSAP SPPSAPALAI PAAAPPLPTS VPAGAGVEAG AGAETVSSSL 120
  121 MIFSSFFLYN 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.764 d.2.1 Lysozyme-like
View Download 0.675 d.56.1 GroEL-intermediate domain like
View Download 0.614 d.56.1 GroEL-intermediate domain like
View Download 0.568 a.118.9 ENTH/VHS domain
View Download 0.555 a.121.1 Tetracyclin repressor-like, C-terminal domain
View Download 0.555 a.121.1 Tetracyclin repressor-like, C-terminal domain
View Download 0.554 a.258.1 Description not found.
View Download 0.537 a.4.1 Homeodomain-like
View Download 0.527 c.23.1 CheY-like
View Download 0.484 a.1.1 Globin-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle