| Protein: | INP53 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1107 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for INP53.
| Description | E-value | Query Range |
Subject Range |
|
|
1108.0 | [0..1] | [1090..1] |
|
|
1022.0 | [0..18] | [1086..27] |
|
|
1019.0 | [0..18] | [1072..27] |
|
|
1019.0 | [0..18] | [1076..27] |
|
|
1018.0 | [0..1] | [1107..1] |
|
|
1006.0 | [0..18] | [1068..27] |
|
Region A: Residues: [1-403] |
1 11 21 31 41 51
| | | | | |
1 MIIFVSEEPE RRLAIVSNLY ALVLKPVGKK PSDKPLCAIE LLQKNDLKKY GFKRLTSHEI 60
61 FGVIGLIEVN GLLFVGAITG KSKVAQPCPG ETVNKIFAVD FFCLNDNSWD FIEIDSSGYP 120
121 VLPETASTEY QDALPKHPCY ELKKLLSNGS FYYSSDFDLT STLQHRGYGQ HSLSTDTYEE 180
181 EYMWNSFLMQ EMITYRDHLD TNLKQILDDE GFLTTVIRGF AETFVSYVKK LKVALTIISK 240
241 QSWKRAGTRF NARGVDDEAN VANFVETEFI MYSSQYCYAF TQIRGSIPVF WEQGTSLINP 300
301 RVQITRSFEA TQPVFDKHIM KSVEKYGPVH VVNLLSTKSS EIELSKRYKE HLTHSKKLNF 360
361 NKDIFLTEFD FHKETSQEGF SGVRKLIPLI LDSLLSSGYY SYD
|
| Detection Method: |  |
| Confidence: | 182.769551 |
| Match: | PF02383 |
| Description: | SacI homology domain |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [404-495] |
1 11 21 31 41 51
| | | | | |
1 VREKKNISEQ HGIFRTNCLD CLDRTNLAQQ IISLAAFRTF LEDFRLISSN SFIDDDDFVS 60
61 KHNTLWADHG DQISQIYTGT NALKSSFSRK GK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.879 | a.2.15 | Description not found. |
| View | Download | 0.834 | a.7.16 | Description not found. |
| View | Download | 0.798 | a.24.18 | Description not found. |
| View | Download | 0.713 | a.7.15 | Description not found. |
| View | Download | 0.680 | a.69.4 | Description not found. |
| View | Download | 0.590 | a.26.1 | 4-helical cytokines |
| View | Download | 0.554 | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.518 | a.24.3 | Cytochromes |
|
Region A: Residues: [496-889] |
1 11 21 31 41 51
| | | | | |
1 MSLAGALSDA TKSVSRIYIN NFMDKEKQQN IDTLLGRLPY QKAVQLYDPV NEYVSTKLQS 60
61 MSDKFTSTSN INLLIGSFNV NGATKKVDLS KWLFPIGEKF KPDIVVLGLQ EVIELSAGSI 120
121 LNADYSKSSF WENLVGDCLN QYDDKYLLLR VEQMTSLLIL FFVKADKAKY VKQVEGATKK 180
181 TGFRGMAGNK GAVSIRFEYG ATSFCFVNSH LAAGATNVEE RRSDYESIVR GITFTRTKMI 240
241 PHHDSIFWLG DMNYRINLPN EDVRRELLNQ EEGYIDKLLH FDQLTLGINS GSVFEGFKEP 300
301 TLKFRPTYKY DPGTGTYDSS EKERTPSWTD RIIYKGENLL PLSYSDAPIM ISDHRPVYAA 360
361 YRAKITFVDD KERLSLKKRL FTEYKQEHPE EPGS
|
| Detection Method: | |
| Confidence: | 862.67837 |
| Match: | 1i9yA |
| Description: | Synaptojanin, IPP5C domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [890-1107] |
1 11 21 31 41 51
| | | | | |
1 LISDLLSLDL DNKSTDGFKS SSESSLLDID PIMAQPTASS VASSSPVSSA SASLQPVRTQ 60
61 NSSQSRTPIK KPVLRPPPPP AHKSVSAPAP STSKEKSPTP QTSTASLSSV TKNIQENKPL 120
121 AQNRRIPPPG FSQNILTPKS TSNLASPMSS KVDLYNSASE STRSAQDARQ QTPTAFAASR 180
181 DVNGQPEALL GDENPIEPEE KAKLNHMTLD SWQPLTPK
|
| Detection Method: | |
| Confidence: | 14.34 |
| Match: | |
| Description: | No description for 1ldvA was found. |
