YRC Public Data Repository - Protein Structure Prediction

Protein:	AAD15
Organism:	Saccharomyces cerevisiae
Length:	143 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AAD15.

Description	E-value	Query Range	Subject Range
gi\|6562980 - gi\|6562980\|gb\|AAF17106.1\|AF057715_1 auxin-induced atb2 [Arabidopsis thaliana]	2.0E-36	[2..133]	[198..329]
gi\|7507776 - gi\|7507776\|pir\|\|T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans	4.0E-32	[2..116]	[194..308]
gi\|7471099 - pir\|\|E75296 aldo/keto reductase - Deinococcus radiodurans (strain R1) gi\|15807252, gi\|... - gi\|6460065\|gb\|AAF11806.1\|AE002058_6 aldo/keto reductase [Deinococcus radiodurans R1], gi\|15807252\|re...	2.0E-31	[2..131]	[195..327]
gi\|17427226 - gi\|17427226\|emb\|CAD13745.1\| putative aldo/keto reductase; oxidoreductase protein [Ralstonia solanace... gi\|17544936 - gi\|17544936\|ref\|NP_518338.1\| oxidoreductase transmembrane protein [Ralstonia solanacearum GMI1000]	3.0E-31	[2..132]	[206..336]
gi\|25316293 - pir\|\|C97390 aldo/keto reductase [imported] - Agrobacterium tumefaciens (strain C58, Cereon) gi\|15155153, gi\|... - gi\|15887610\|ref\|NP_353291.1\| hypothetical protein AGR_C_447 [Agrobacterium tumefaciens str. C58], gi...	1.0E-30	[2..131]	[233..362]

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Predicted Domain #1

Region A:
Residues: [1-143]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARHFGMALA PWDVMGGGRF QSKKAMEERR KNGECIRSFV GASEQTDAEI KISEALAKVA  60
   61 EEHGTESVTA IAIAYVRSKA KNVFPSVEGG KIEDLKENIK ALSIDLTPDN IKYLENVVPF 120
  121 DIGFPNTFIV LNSLTQKYGT NNV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	25.0
Match:	1exbA_
Description:	Voltage-dependent K+ channel beta subunit
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits