| Protein: | HPF1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 967 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HPF1.
| Description | E-value | Query Range |
Subject Range |
|
|
347.0 | [0..5] | [961..1357] |
|
|
326.0 | [0..2] | [964..1019] |
|
|
312.0 | [0..13] | [966..305] |
|
|
289.0 | [0..8] | [965..114] |
|
|
284.0 | [0..55] | [965..179] |
|
|
279.0 | [0..34] | [859..22] |
|
|
269.0 | [0..80] | [965..140] |
|
|
268.0 | [0..2] | [962..138] |
|
Region A: Residues: [1-428] |
1 11 21 31 41 51
| | | | | |
1 MFNRFNKLQA ALALVLYSQS ALGQYYTNSS SIASNSSTAV SSTSSGSVSI SSSIELTSST 60
61 SDVSSSLTEL TSSSTEVSSS IAPSTSSSEV SSSITSSGSS VSGSSSITSS GSSVSSSSSA 120
121 TESGSSASGS SSATESGSSV SGSSTSITSG SSSATESGSS VSGSTSATES GSSASGSSSA 180
181 TESGSSASGS SSATESGSSV SGSSSATESG SSVSGSSSAT ESGSASSVPS SSGSVTESGS 240
241 SSSASESSIT QSGTASGSSA SSTSGSVTQS GSSVSGSSAS SAPGISSSIP QSTSSASTAS 300
301 GSITSGTLSS ITSSASSATA TASNSLSSSD GTIYLPSTTI SGDITLTGSV IATEAVEVAA 360
361 GGKLTLLDGD KYVFSADFII HGGVFVEKSK PTYPGTEFDI SGENFDVSGT FNAEEPAASS 420
421 ASAYSFTP
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [429-491] |
1 11 21 31 41 51
| | | | | |
1 GSFDNSGDIS LSLSESTKGE VTFSPYSNSG AFSFSNAILN GGSVSGLQRR AESGSVNNGE 60
61 INL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.691 | d.348.1 | Description not found. |
| View | Download | 0.651 | d.348.1 | Description not found. |
| View | Download | 0.646 | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.568 | b.34.13 | Chromo domain-like |
| View | Download | 0.559 | b.84.2 | Rudiment single hybrid motif |
| View | Download | 0.559 | b.84.2 | Rudiment single hybrid motif |
| View | Download | 0.523 | b.84.2 | Rudiment single hybrid motif |
| View | Download | 0.519 | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.517 | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.516 | d.9.1 | Interleukin 8-like chemokines |
|
Region A: Residues: [492-967] |
1 11 21 31 41 51
| | | | | |
1 ENGSTYVVVE PVSGSGTINI ISGNLYLHYP DTFTGQTVVF KGEGVLAVDP TETNTTPIPV 60
61 VGYTGENQIA ITADVTALSY DSATGVLTAT QGNSQFSFSI GTGFSSSGFN VSEGTFAGAY 120
121 AYYLNYGGVV ASSATPSSTS TTSGATNSTS GSTSFGASVT GSTASTSFGA SVTGSTASTL 180
181 ISGSPSVYTT TLTYATTTST VVVSCSETTD SNGNVYTITT TVPCSSTTAT ITSCDETGCH 240
241 VTTSTGTVAT ETVSSKSYTT VTVTHCDNNG CNTKTVTSEC PEETSATTTS PKSYTTVTVT 300
301 HCDDNGCNTK TVTSEAPEAT TTTVSPKTYT TATVTQCDDN GCSTKTVTSE APKETSETSE 360
361 TSAAPKTYTT ATVTQCDDNG CNVKIITSQI PEATSTVTAT SASPKSYTTV TSEGSKATSL 420
421 TTAISKASSA ISTYSKSAAP IKTSTGIIVQ SEGIAAGLNA NTLNALVGIF VLAFFN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
