| Protein: | ALR1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 859 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALR1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..859] | [1..859] |
|
|
0.0 | [148..797] | [230..800] |
|
|
0.0 | [223..797] | [1..496] |
|
|
0.0 | [317..798] | [2..449] |
|
|
9.0E-72 | [391..801] | [7..349] |
|
|
4.0E-69 | [397..801] | [23..362] |
|
|
3.0E-67 | [421..801] | [37..352] |
|
Region A: Residues: [1-365] |
1 11 21 31 41 51
| | | | | |
1 MSSSSSSSES SPNLSRSNSL ANTMVSMKTE DHTGLYDHRQ HPDSLPVRHQ PPTLKNKEIA 60
61 KSTKPSIPKE QKSATRYNSH VDVGSVPSRG RMDFEDEGQG MDETVAHHQL RASAILTSNA 120
121 RPSRLAHSMP HQRQLYVESN IHTPPKDVGV KRDYTMSSST ASSGNKSKLS ASSSASPITK 180
181 VRKSSLVSPV LEIPHESKSD THSKLAKPKK RTYSTTSAHS SINPAVLLTK STSQKSDADD 240
241 DTLERKPVRM NTRASFDSDV SQASRDSQET EEDVCFPMPP QLHTRVNGID FDELEEYAQF 300
301 ANAEKSQFLA SLQVPNEQKY SNVSQDIGFT SSTSTSGSSA ALKYTPRVSQ TGEKSESTNE 360
361 TEIHE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [366-554] |
1 11 21 31 41 51
| | | | | |
1 KKEDEHEKIK PSLHPGISFG KNKVEGEENE NIPSNDPAYC SYQGTDFQIP NRFSFFCSES 60
61 DETVHASDIP SLVSEGQTFY ELFRGGEPTW WLDCSCPTDD EMRCIAKAFG IHPLTAEDIR 120
121 MQETREKVEL FKSYYFVCFH TFENDKESED FLEPINVYIV VCRSGVLTFH FGPISHCANV 180
181 RRRVRQLRD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [555-677] |
1 11 21 31 41 51
| | | | | |
1 YVNVNSDWLC YALIDDITDS FAPVIQSIEY EADAIEDSVF MARDMDFAAM LQRIGESRRK 60
61 TMTLMRLLSG KADVIKMFAK RCQDEANGIG PALTSQINIA NLQARQDNAS HIKNNSSTTV 120
121 PNN
|
| Detection Method: | |
| Confidence: | 7.71 |
| Match: | 1hciA |
| Description: | alpha-actinin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [678-859] |
1 11 21 31 41 51
| | | | | |
1 YAPTTSQPRG DIALYLGDIQ DHLLTMFQNL LAYEKIFSRS HTNYLAQLQV ESFNSNNKVT 60
61 EMLGKVTMIG TMLVPLNVIT GLFGMNVKVP GENSSIAWWF GILGVLLLLA VLGWFLASYW 120
121 IKRIDPPATL NEAAESGAKS VISSFLPKRN KRFNDRSKNI NVRAGPSNKS VASLPSRYSR 180
181 YD
|
| Detection Method: | |
| Confidence: | 7.71 |
| Match: | 1hciA |
| Description: | alpha-actinin |
| Matching Structure (courtesy of the PDB): |
|
