| Protein: | SMF1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 575 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SMF1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..575] | [1..575] |
|
|
0.0 | [24..496] | [6..467] |
|
|
0.0 | [38..496] | [15..461] |
|
|
0.0 | [41..496] | [29..473] |
|
|
0.0 | [44..496] | [40..482] |
|
Region A: Residues: [1-94] |
1 11 21 31 41 51
| | | | | |
1 MVNVGPSHAA VAVDASEARK RNISEEVFEL RDKKDSTVVI EGEAPVRTFT SSSSNHERED 60
61 TYVSKRQVMR DIFAKYLKFI GPGLMVSVAY IDPG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [95-506] |
1 11 21 31 41 51
| | | | | |
1 NYSTAVDAGA SNQFSLLCII LLSNFIAIFL QCLCIKLGSV TGLDLSRACR EYLPRWLNWT 60
61 LYFFAECAVI ATDIAEVIGT AIALNILIKV PLPAGVAITV VDVFLIMFTY KPGASSIRFI 120
121 RIFECFVAVL VVGVCICFAI ELAYIPKSTS VKQVFRGFVP SAQMFDHNGI YTAISILGAT 180
181 VMPHSLFLGS ALVQPRLLDY DVKHGNYTVS EEQDKVKKSK STEEIMEEKY FNYRPTNAAI 240
241 KYCMKYSMVE LSITLFTLAL FVNCAILVVA GSTLYNSPEA DGADLFTIHE LLSRNLAPAA 300
301 GTIFMLALLL SGQSAGVVCT MSGQIVSEGH INWKLQPWQR RLATRCISII PCLVISICIG 360
361 REALSKALNA SQVVLSIVLP FLVAPLIFFT CKKSIMKTEI TVDHTEEDSH NH
|
| Detection Method: | |
| Confidence: | 245.60206 |
| Match: | PF01566 |
| Description: | Natural resistance-associated macrophage protein |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [507-575] |
1 11 21 31 41 51
| | | | | |
1 QNNNDRSAGS VIEQDGSSGM EIENGKDVKI VYMANNWIIT VIAIIVWLFL SLLNVYAIVQ 60
61 LGMSHGDIS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
