| Protein: | MSN1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 382 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MSN1.
| Description | E-value | Query Range |
Subject Range |
|
|
533.0 | [0..1] | [382..1] |
|
|
391.0 | [0..34] | [368..310] |
|
|
227.0 | [0..19] | [382..12] |
|
|
218.0 | [0..15] | [382..48] |
|
Region A: Residues: [1-87] |
1 11 21 31 41 51
| | | | | |
1 MASNQHIGAS NLNENEAILT NRVAELERRM SMFEGIFHAL SNRLDLHFKK YDVVVNSQQQ 60
61 QINELTAFLS TLLNDQQRHA EILSEKL
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.762 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.762 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.756 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.670 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.670 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.670 | a.63.1 | Apolipophorin-III |
| View | Download | 0.663 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.660 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.636 | a.25.1 | Ferritin-like |
|
Region A: Residues: [88-238] |
1 11 21 31 41 51
| | | | | |
1 SGTLHGVSAT SISLSQTLDP QGFTDGTTAP GAPRNYTSVP MNNDQTAHPQ NEGAVSNETL 60
61 FEDILNGNSQ ENDKSQQQTN SSNSISQENN STNPSVDTRF NKPQNYNSNL VPSLEEYSAN 120
121 PPNNDGGQSQ GLYISSNSSQ SRQSPNLQKV S
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.275 | N/A | N/A | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.268 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.245 | N/A | N/A | d.18.1 | ssDNA-binding transcriptional regulator domain |
| View | Download | 0.243 | N/A | N/A | a.62.1 | Hepatitis B viral capsid (hbcag) |
| View | Download | 0.242 | N/A | N/A | d.2.1 | Lysozyme-like |
| View | Download | 0.238 | N/A | N/A | c.68.1 | Nucleotide-diphospho-sugar transferases |
|
Region A: Residues: [239-382] |
1 11 21 31 41 51
| | | | | |
1 PNHENAVESN AQESVPTFEE EQYETKTGLK RKRIVCTRPF EFIKSPHSVM EVWKEYTEGV 60
61 NGQPSIRKME ALYQTAWRRD PAVNKRYSRR KVLWKAIQTG LNRGYSLNYV VEILENSRYV 120
121 NDKQKVKQPI GWLCHSSHIP ETLK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.589 | a.4.1 | Homeodomain-like |
| View | Download | 0.508 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.482 | a.74.1 | Cyclin-like |
| View | Download | 0.451 | a.74.1 | Cyclin-like |
| View | Download | 0.432 | a.118.8 | TPR-like |
| View | Download | 0.426 | a.74.1 | Cyclin-like |
| View | Download | 0.426 | a.74.1 | Cyclin-like |
| View | Download | 0.389 | a.74.1 | Cyclin-like |
