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View Structure Prediction Details

Protein: NDJ1
Organism: Saccharomyces cerevisiae
Length: 352 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NDJ1.

Description E-value Query
Range
Subject
Range
NDJ1_YEAST - Non-disjunction protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NDJ1 PE=1 SV=1
NDJ1 - Meiosis-specific telomere protein, required for bouquet formation, effective homolog pairing, ordere...
0.0 [1..352] [1..352]

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Predicted Domain #1
Region A:
Residues: [1-352]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKDNRLASI LLQPVASSSG NCTEFHDSKL HTLQEELNFL PLEGVASNVC PPMFRGHKNY  60
   61 VFVLYCLNQV DLVTNLQDST KRYYPLQIFK DCQLSSLVQK DFSHYFQLSR QKEGEDRNDS 120
  121 DTTLVNVVNS GVSRHRSQLL KMCIIPRICS FDKSNSKTYK LIQEYVNRFE TVLTKFGPEK 180
  181 DFTKVYANWS KLIESFNELI LHDLLVKWQQ WSELTQPNAT VHQNIPNVLR ELVIKLTQRY 240
  241 FTFQPSYSCS IDEFTTILLN KNALSLLDVF RKPRKYKLNF GLWLDCQNGI LIFTNGIVQM 300
  301 ADEITSERVK SFVRPAHLLV LEDHSNDEAV KKLMFFTFSA ILQCFTDEIL NC

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle