| Protein: | SPO21 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 609 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPO21.
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-74 | [40..609] | [837..1428] |
|
|
2.0E-73 | [40..609] | [51..642] |
|
|
2.0E-73 | [40..609] | [835..1426] |
|
|
1.0E-72 | [40..609] | [835..1426] |
|
|
2.0E-72 | [40..609] | [834..1425] |
|
Region A: Residues: [1-392] |
1 11 21 31 41 51
| | | | | |
1 MDNILKASNM EGTSTMTVTS RSSEDSSCIS NHEQDTDTHK DGDTSGLENS KISKRKWMKE 60
61 FFKLSKSPAS KSSRSIGSMK SNQSLVSMKS SDDGNSYKND YSSICGNSLP SAGLSRSNSV 120
121 KELKLDSTGS QRSKNNVAML ARSSTTSQTT CSSSSSSSSY NSIKGNENDI LLQNNNHFRH 180
181 NKEIPQSKGS SNINTASIMS QYNVDTQATA IMSDMQKQYD SQQMTSPFVN EDLHFDPNGE 240
241 VSHVIKAIFK EIGYKYDDFS DIPVFQLMQE MYQLVKKNSS ARRTKITDYA SKLKEKEAQL 300
301 KSQNDKILKL ETTNKAYKTK YKEVSLENKK IKEAFKELDN ESYNHDEELL KKYKYTRETL 360
361 DRVNREQQLI IDQNEFLKKS VNELQNEVNA TN
|
| Detection Method: |  |
| Confidence: | 20.522879 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [393-609] |
1 11 21 31 41 51
| | | | | |
1 FKFSLFKEKY AKLADSITEL NTSTKKREAL GENLTFECNE LKEICLKYKK NIENISNTNK 60
61 NLQNSFKNER KKVLDLRNER NLLKKEILLI ECHGSYSLLL VSNILTCYRF LLPSDTIIET 120
121 ESLIKELLNM NNSLSNHVSS SDEPPAEYSK RLELKCVEFE EKLLYFYQEL VTKKIIDVIY 180
181 KCFINYYKKS RQTDQKSNQN SSTPYKQSQR QVPHSIK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [533-609] |
1 11 21 31 41 51
| | | | | |
1 SDEPPAEYSK RLELKCVEFE EKLLYFYQEL VTKKIIDVIY KCFINYYKKS RQTDQKSNQN 60
61 SSTPYKQSQR QVPHSIK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
