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View Structure Prediction Details

Protein: ATP19
Organism: Saccharomyces cerevisiae
Length: 68 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATP19.

Description E-value Query
Range
Subject
Range
gi|45190627, gi|... - gi|45190627|ref|NP_984881.1| AER021Cp [Ashbya gossypii ATCC 10895], gi|44983606|gb|AAS52705.1| AER02...
gi|44983606 - gi|44983606|gb|AAS52705.1| AER021Cp [Ashbya gossypii ATCC 10895]
82.0 [0..1] [66..1]
gi|49657637 - gi|49657637|emb|CAG90437.1| DEHA2G09680p [Debaryomyces hansenii]
gi|50426739, gi|... - gi|50426739|ref|XP_461967.1| hypothetical protein DEHA0G10538g [Debaryomyces hansenii CBS767], gi|49...
61.0 [0..3] [66..2]

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Predicted Domain #1
Region A:
Residues: [1-68]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAAYHFMGK AIPPHQLAIG TLGLLGLLVV PNPFKSAKPK TVDIKTDNKD EEKFIENYLK  60
   61 KHSEKQDA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.581 d.58.24 CheY-binding domain of CheA
View Download 0.554 d.58.18 Regulatory domain in the aminoacid metabolism
View Download 0.541 d.58.18 Regulatory domain in the aminoacid metabolism
View Download 0.529 d.58.7 RNA-binding domain, RBD
View Download 0.517 a.60.1 SAM/Pointed domain
View Download 0.506 d.94.1 HPr-like
View Download 0.500 d.58.18 Regulatory domain in the aminoacid metabolism
View Download 0.431 d.58.17 Metal-binding domain
View Download 0.275 d.58.7 RNA-binding domain, RBD
View Download 0.275 d.58.3 Protease propeptides/inhibitors
View Download 0.271 d.58.7 RNA-binding domain, RBD
View Download 0.243 d.74.1 Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH)
View Download 0.229 d.51.1 Eukaryotic type KH-domain (KH-domain type I)


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle