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View Structure Prediction Details

Protein: NBA1
Organism: Saccharomyces cerevisiae
Length: 501 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NBA1.

Description E-value Query
Range
Subject
Range
NBA1 - Protein of unknown function, localizes to the bud neck and cytoplasm; interacts with Nap1p; may inte...
NBA1_YEAST - Protein NBA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NBA1 PE=1 SV=1
0.0 [1..501] [1..501]

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Predicted Domain #1
Region A:
Residues: [1-501]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEEREENGI SRATLNTQRL SAMIDSLNNE KDDRLFPSPT TTRTMITEEK ADQSDVFKPP  60
   61 SRLLRSPAGD VSLPPGDNRS SMISNYSGII QEGVEVSYVV KNRQQTQERR TSKDSNSLYS 120
  121 LKEPVSKNEL PSLPMLPSEA TLTKHLSDNQ STKSNTNADE IVIKPVTNAK PVGRFNSNTS 180
  181 KKVEGRGSLK LLSSPLRQEK VMRSSIGSGN LASESGSSTY NTKFHQSIQE QLEEEEEGNV 240
  241 SDKLSIVSSV IPELYTTTNE APKAINPIRS ETNDYNPTIP PRSKDRPRSR LFIEEGDGEG 300
  301 DLLTEEILPT PVQPGGHYKN SSQISTVSEQ KSESYYSAAT SMPPEEETYL TRPLPSTPNE 360
  361 DSRVTSNLKR DDTLKAIHDR ANHTSTSTNK QDDDMYEDII EETPKKTKLK KDTKKKLNKK 420
  421 KSVKELRSFD IDTLNQLLSV TKGTLIGSEF AQLGMKIEEK RALERLVDSL SRLTADMVLD 480
  481 PDRYEEGLKR LDKATKALEG F

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle