YRC Public Data Repository - Protein Structure Prediction

Protein:	MIM1
Organism:	Saccharomyces cerevisiae
Length:	113 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MIM1.

Description	E-value	Query Range	Subject Range
MIM1_SCHPO - Mitochondrial import protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mim1 PE=3 S... tom13 - mitochondrial TOM complex subunit Tom13	114.0	[0..25]	[86..3]
MIM1_NEUCR, U322... - (Q8X0G8) Hypothetical UPF0322 protein B13O8.080, Mitochondrial import protein 1 OS=Neurospora crassa... MIM1_NEUCR - Mitochondrial import protein 1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / D...	94.0	[0..38]	[94..49]
MIM1_ASHGO, U322... - (P62512) Hypothetical UPF0322 protein AAR013W, Mitochondrial import protein 1 OS=Ashbya gossypii GN=... MIM1_ASHGO - Mitochondrial import protein 1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL...	93.0	[0..36]	[98..75]
gi\|50304211, gi\|... - gi\|50304211\|ref\|XP_452055.1\| unnamed protein product [Kluyveromyces lactis], gi\|49641187\|emb\|CAH0244... gi\|49641187 - gi\|49641187\|emb\|CAH02448.1\| KLLA0B11814p [Kluyveromyces lactis]	90.0	[0..36]	[92..81]
gi\|42551515, gi\|... - gi\|46122971\|ref\|XP_386039.1\| hypothetical protein FG05863.1 [Gibberella zeae PH-1], gi\|42551515\|gb\|E...	82.0	[0..38]	[94..134]
gi\|145010890, gi... - gi\|39940714\|ref\|XP_359894.1\| hypothetical protein MGG_04883 [Magnaporthe grisea 70-15], gb\|EAA52191....	82.0	[0..25]	[92..29]
gi\|159126094 - gi\|159126094\|gb\|EDP51210.1\| conserved hypothetical protein [Aspergillus fumigatus A1163] gi\|70984950, gi\|... - gi\|70984950\|ref\|XP_747981.1\| conserved hypothetical protein [Aspergillus fumigatus Af293], gi\|668456...	79.0	[0..38]	[92..50]
gi\|114189520, gi... - gi\|115433062\|ref\|XP_001216668.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	79.0	[0..41]	[92..48]
gi\|88178794, gi\|... - gi\|88178794\|gb\|EAQ86262.1\| hypothetical protein CHGG_07515 [Chaetomium globosum CBS 148.51], gi\|1161...	79.0	[0..41]	[107..52]
gi\|169776513 - gi\|169776513\|ref\|XP_001822723.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|220691653, gi... - gi\|238503219\|ref\|XP_002382843.1\| mitochondrial import protein, putative [Aspergillus flavus NRRL3357... gi\|83771458 - gi\|83771458\|dbj\|BAE61590.1\| unnamed protein product [Aspergillus oryzae]	78.0	[0..29]	[92..36]

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Predicted Domain #1

Region A:
Residues: [1-113]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEVVGFWES VSDDESEDKD CMEVQNTVSA DESPLVQSLV SFVGSCSINL LLPFLNGMML  60
   61 GFGELFAHEL CWRFNWFNHR NKGYKVYPES RKIAALKEIS SPGTRGRVAS KFL

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	59.657577
Match:	PF08219.2
Description:	No description for PF08219.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits