| Protein: | LAG2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 660 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LAG2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..660] | [1..660] |
|
Region A: Residues: [1-83] |
1 11 21 31 41 51
| | | | | |
1 MSLHISKLIE QYRSTKDNDL KYMLLRQNFK INDIEDELAP LVNELLLPVL VEEQDMEILN 60
61 LVSFQVLPDL VLSMISDPAA AQL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [84-209] |
1 11 21 31 41 51
| | | | | |
1 GWVISLICDP LLNQSMIHAN RSFVLIETLR NVLQKIENSP HLDYHQPVNS SLEFISKFIV 60
61 EMKRHMCDVD AAQLSHSLSE SNMLIYIESL NLLLKFSFFS DAASPSVMVT LPFDILNDVF 120
121 TIAQDY
|
|
Region B: Residues: [329-550] |
1 11 21 31 41 51
| | | | | |
1 LSILNDSLTR TQNENDHGSD NLIDSDDGFG SDNDPEQQAY LDELVSEGYD ENMYDGDTDD 60
61 EDADDINVEK NDEATKDITE TNKILLIFSE LHYPQEERFS ELLVELQTKI AINTSLIDKI 120
121 LSKETTELPT HNGEIADLNE ILNEVKGNKP IRKNVIFCTL AHTLSLQSGS ELSVLQLSIE 180
181 VIDHLLVKNH SNNITRGEQF QLIKLILPHL KTNKSFIDTL KA
|
| Detection Method: | |
| Confidence: | 7.67 |
| Match: | 1e6vA |
| Description: | Alpha chain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [210-328] |
1 11 21 31 41 51
| | | | | |
1 SATNTNESID RITEKLLLTS TQLTHPVDLE NLCPKMKYNT LAAVSRIWYK FGPIVDKLFT 60
61 NRLLPVLFPP QMGEECNVED VLEIVHNFHP YFSIRRLKDN RPLLSDSTIS QLREGLFGM
|
| Detection Method: | |
| Confidence: | 7.67 |
| Match: | 1e6vA |
| Description: | Alpha chain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [551-660] |
1 11 21 31 41 51
| | | | | |
1 GNFTQKIDEG VTLRTMILSL LLQLFPLDYS MLGEILPTIA RYSVRDKDLG VRDLSFQLLD 60
61 QILRTYYNYL IGIDWEWYKD DFYQVLQETC IKKDINTNLL LQFPPYLPHD
|
| Detection Method: | |
| Confidence: | 8.59 |
| Match: | 1l9uD |
| Description: | DNA-directed RNA polymerase alpha(2), beta, beta-prime and omega subunits |
Matching Structure (courtesy of the PDB): |
|
