YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: TAT2
Organism: Saccharomyces cerevisiae
Length: 592 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TAT2.

Description E-value Query
Range
Subject
Range
TAT2 - High affinity tryptophan and tyrosine permease, overexpression confers FK506 and FTY720 resistance
TAT2_YEAST - Tryptophan permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TAT2 PE=1 SV=1
gi|190407322 - gi|190407322|gb|EDV10589.1| tryptophan permease [Saccharomyces cerevisiae RM11-1a]
0.0 [1..592] [1..592]
gi|68470470, gi|... - gi|68470731|ref|XP_720611.1| N-acetylglucosamine-inducible general amino acid permease [Candida albi...
gi|18568390 - gi|18568390|gb|AAL76065.1| Gap1 protein [Candida albicans]
gi|238882678 - gi|238882678|gb|EEQ46316.1| general amino-acid permease GAP1 [Candida albicans WO-1]
0.0 [16..592] [2..582]
gi|447739 - gi|447739|prf||1915304A nylB upstream ORF
0.0 [2..591] [4..608]

Back

Predicted Domain #1
Region A:
Residues: [1-53]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEDFISSVK RSNEELKERK SNFGFVEYKS KQLTSSSSHN SNSSHHDDDN QHG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [54-592]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KRNIFQRCVD SFKSPLDGSF DTSNLKRTLK PRHLIMIAIG GSIGTGLFVG SGKAIAEGGP  60
   61 LGVVIGWAIA GSQIIGTIHG LGEITVRFPV VGAFANYGTR FLDPSISFVV STIYVLQWFF 120
  121 VLPLEIIAAA MTVQYWNSSI DPVIWVAIFY AVIVSINLFG VRGFGEAEFA FSTIKAITVC 180
  181 GFIILCVVLI CGGGPDHEFI GAKYWHDPGC LANGFPGVLS VLVVASYSLG GIEMTCLASG 240
  241 ETDPKGLPSA IKQVFWRILF FFLISLTLVG FLVPYTNQNL LGGSSVDNSP FVIAIKLHHI 300
  301 KALPSIVNAV ILISVLSVGN SCIFASSRTL CSMAHQGLIP WWFGYIDRAG RPLVGIMANS 360
  361 LFGLLAFLVK SGSMSEVFNW LMAIAGLATC IVWLSINLSH IRFRLAMKAQ GKSLDELEFV 420
  421 SAVGIWGSAY SALINCLILI AQFYCSLWPI GGWTSGKERA KIFFQNYLCA LIMLFIFIVH 480
  481 KIYYKCQTGK WWGVKALKDI DLETDRKDID IEIVKQEIAE KKMYLDSRPW YVRQFHFWC

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 184.657577
Match: PF00324
Description: Amino acid permease

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle