YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YNR077C
Organism: Saccharomyces cerevisiae
Length: 84 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YNR077C.

Description E-value Query
Range
Subject
Range
YER188C-A - Putative protein of unknown function
YE18A_YEAST - UPF0320 protein YER188C-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YER188C-A PE=3...
141.0 [0..1] [81..16]

Back

Predicted Domain #1
Region A:
Residues: [1-84]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHGTCLSGLY PEPFTHNSHD YPHFNIYISF GGPKYCITAL NTYVIPLLHH ILTTQFIHTY  60
   61 FNIPTKSPPK SPKHKNYLSF NFTK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 55.552842
Match: PF04318.3
Description: No description for PF04318.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.849 N/A N/A c.47.1 Thioredoxin-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle