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View Structure Prediction Details

Protein: YNR062C
Organism: Saccharomyces cerevisiae
Length: 327 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YNR062C.

Description E-value Query
Range
Subject
Range
YN91_YEAST - Uncharacterized membrane protein YNR062C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN...
YNR062C - Putative membrane protein of unknown function
0.0 [1..327] [1..327]

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Predicted Domain #1
Region A:
Residues: [1-327]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIAQDRGIV FKLLSIYRAA AGIFMALAQL IVIFFGYCDF KIKGYRIASY NAPTFASSFI  60
   61 ILAVCLLLVV VLENPEVKVT NSENSLFSAL KQFFRVERKK LISCLILLWS MFLSSFIMSE 120
  121 VVYFMPLFLT LHVNWDTKFQ GIAFMVASIL GVTGSYFAPK LINVGCSCGR AKDGGLEESD 180
  181 TTGSETVEVK KKDSLYSGQV FLSIFALFVS LLGQAFMIGA SEALKHKSMP PTNSGIFFSA 240
  241 GMSITLLGYN FLASSIPALF SMYIDPKLKV QLMPSIGAIS GIGKLVAPIV LAALYGTRLG 300
  301 LSIAVGFGMI LVAVSIPPLI WLRKKRC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [175-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLEESDTTGS ETVEVKKKDS LYSGQVFLSI FALFVSLLGQ AFMIGASEAL KHKSMPPTN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [234-327]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGIFFSAGMS ITLLGYNFLA SSIPALFSMY IDPKLKVQLM PSIGAISGIG KLVAPIVLAA  60
   61 LYGTRLGLSI AVGFGMILVA VSIPPLIWLR KKRC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle