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View Structure Prediction Details

Protein: PET494
Organism: Saccharomyces cerevisiae
Length: 489 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PET494.

Description E-value Query
Range
Subject
Range
PT494_YEAST - COX3 mRNA-specific translational activator PET494 OS=Saccharomyces cerevisiae (strain ATCC 204508 / ...
PET494 - Mitochondrial translational activator specific for the COX3 mRNA, acts together with Pet54p and Pet1...
0.0 [1..489] [1..489]
PT494_SACBA - COX3 mRNA-specific translational activator PET494 OS=Saccharomyces bayanus GN=PET494 PE=3 SV=1
0.0 [1..489] [1..489]

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Predicted Domain #1
Region A:
Residues: [1-489]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLKKGKRSI STVWRLLWKR FYSVNSKTNM HFSRSRKKPV TNFTRTNGLL LSCNGDTFPY  60
   61 LRTLWRYFNA PGNLMFVTTN IVAFMGIVTY NTLVTISSER AFEEQMMAAQ VSLAKQREEL 120
  121 ETTALSLPRD IELRGEEDDI KWEQPDVAHV REDPLVEEQN AKLDTPIKQY TLGDLILNKR 180
  181 ENVTDYDSQR AKASIFHMLY AYMLYRDVIQ PTTMTQNNNS EEWRREVELL TKGKEVQGTH 240
  241 RRIDVFYDLW NKNFDKIVTS PEKVQNFQLP NWSKYPTILK FICTELHDNS LKTLGEFKQF 300
  301 YGKVRSNEVK KLLGLWLYDH SFLFPHNIYD NRTEEDFYDI LINDSMQDNR IFQKYSSIVM 360
  361 NPYNERTQLF FPNVNSPSVN KPVPSISLET YTRLLKGYIN LQETGCKYDY NDNIFKLISI 420
  421 LKLNCFLQRN KKKHAGPTVR ILLPRDEDRS QILGTISQAE KRTCYQILSK NRDVVALLKR 480
  481 ISDIQADSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [143-375]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EQPDVAHVRE DPLVEEQNAK LDTPIKQYTL GDLILNKREN VTDYDSQRAK ASIFHMLYAY  60
   61 MLYRDVIQPT TMTQNNNSEE WRREVELLTK GKEVQGTHRR IDVFYDLWNK NFDKIVTSPE 120
  121 KVQNFQLPNW SKYPTILKFI CTELHDNSLK TLGEFKQFYG KVRSNEVKKL LGLWLYDHSF 180
  181 LFPHNIYDNR TEEDFYDILI NDSMQDNRIF QKYSSIVMNP YNERTQLFFP NVN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [376-489]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPSVNKPVPS ISLETYTRLL KGYINLQETG CKYDYNDNIF KLISILKLNC FLQRNKKKHA  60
   61 GPTVRILLPR DEDRSQILGT ISQAEKRTCY QILSKNRDVV ALLKRISDIQ ADSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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