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View Structure Prediction Details

Protein: YNR040W
Organism: Saccharomyces cerevisiae
Length: 256 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YNR040W.

Description E-value Query
Range
Subject
Range
gi|190408961 - gi|190408961|gb|EDV12226.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
YNR040W - Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purifi...
YN8O_YEAST - Uncharacterized protein YNR040W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YNR040W ...
0.0 [1..256] [1..256]

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Predicted Domain #1
Region A:
Residues: [1-256]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNMAAKNQF KGSSFTLAQL IEEVGRNGGK KPVFQYKVPR SIRWASTALA VVFLTYGAAY  60
   61 TDMSWRTARE VYGNATEEEK HSPWFKCKTF GPVALGVLPV ILAAATKHVT SRLVTEMKYL 120
  121 PPLKNSTVPR CQLTRRTYLL GRPVSITREI NELSKNKATK IFTGVGSQGM EDKATFVFFT 180
  181 VDEKAPSFFN KFYIFSRSGS VVKNDARILD CFFNSVAENK LLNRSILTQI LSHTSAKTLF 240
  241 HSGNSRSSIK NIVKPK

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle