| Protein: | DBP6 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 629 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DBP6.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [11..606] | [19..619] |
|
|
0.0 | [17..620] | [20..582] |
|
|
0.0 | [11..605] | [19..577] |
|
|
0.0 | [11..603] | [19..575] |
|
|
0.0 | [11..603] | [19..575] |
|
|
0.0 | [11..606] | [19..619] |
|
|
0.0 | [16..605] | [14..548] |
|
Region A: Residues: [1-169] |
1 11 21 31 41 51
| | | | | |
1 MFASRFDPSQ LTAPAASAPE GIVGTTPPAI VPLKRQATES DNEEYGSHQD SDESSNSSSE 60
61 EDEDRMQVDY GASEEDSSEV EEEESKPSTH STVLSRFKQT VSLQERLGAS DIAESKEDEG 120
121 IEDEAASTHQ LKQIPQPEFV KNPMNLNTNS LQFKSTGWLN TEKIYYDNS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [170-410] |
1 11 21 31 41 51
| | | | | |
1 LIKPFSDYAN ELEAKLLQNI CKNFSTNTFP IQSIILDSIL PVLNFTLNVS KRNFTRRIGD 60
61 ILVNAATGSG KTLAYSIPIV QTLFKRQINR LRCIIIVPTK LLINQVYTTL TKLTQGTSLI 120
121 VSIAKLENSL KDEHKKLSNL EPDILITTPG RLVDHLNMKS INLKNLKFLI IDEADRLLNQ 180
181 SFQGWCPKLM SHLKTDKLDT LPGNVIKMIF SATLTTNTEK LNGLNLYKPK LFLKQTDKLY 240
241 Q
|
| Detection Method: | |
| Confidence: | 395.9897 |
| Match: | 1hv8A_ |
| Description: | Putative DEAD box RNA helicase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [411-629] |
1 11 21 31 41 51
| | | | | |
1 LPNKLNEFNI NIPTAKSVYK PLILLYSICQ FMAHSPIAAK ILIFVKSNES SIRLSKLLQL 60
61 ICESRSQSSV LKNLQNLAVS INSVNSNNSK AENKKIVANF SHHSESAGIT ILITTDIMSR 120
121 GIDINDITQV INYDPPMSSQ QYVHRVGRTA RANELGSAYN LLVGRGERTF FDDLNKDLDR 180
181 DGKSVQPLEL DFTLLESDSE LYTSSLESLK NYHNNTAQA
|
| Detection Method: | |
| Confidence: | 395.9897 |
| Match: | 1hv8A_ |
| Description: | Putative DEAD box RNA helicase |
| Matching Structure (courtesy of the PDB): |
|
