| Protein: | ATG3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 310 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATG3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..310] | [1..310] |
|
|
0.0 | [2..306] | [8..309] |
|
|
0.0 | [2..306] | [8..324] |
|
|
0.0 | [2..306] | [8..309] |
|
|
1.0E-99 | [2..306] | [8..309] |
|
|
1.0E-92 | [11..308] | [16..305] |
|
|
3.0E-92 | [2..306] | [8..300] |
|
|
1.0E-88 | [2..308] | [5..274] |
|
|
8.0E-63 | [11..212] | [16..240] |
|
Region A: Residues: [1-141] |
1 11 21 31 41 51
| | | | | |
1 MIRSTLSSWR EYLTPITHKS TFLTTGQITP EEFVQAGDYL CHMFPTWKWN EESSDISYRD 60
61 FLPKNKQFLI IRKVPCDKRA EQCVEVEGPD VIMKGFAEDG DEDDVLEYIG SETEHVQSTP 120
121 AGGTKDSSID DIDELIQDME I
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.209 | a.118.1 | ARM repeat |
|
Region A: Residues: [142-310] |
1 11 21 31 41 51
| | | | | |
1 KEEDENDDTE EFNAKGGLAK DMAQERYYDL YIAYSTSYRV PKMYIVGFNS NGSPLSPEQM 60
61 FEDISADYRT KTATIEKLPF YKNSVLSVSI HPCKHANVMK ILLDKVRVVR QRRRKELQEE 120
121 QELDGVGDWE DLQDDIDDSL RVDQYLIVFL KFITSVTPSI QHDYTMEGW
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.404 | 0.160 | protein targeting to vacuole | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.444 | 0.129 | protein targeting to vacuole | c.55.3 | Ribonuclease H-like |
| View | Download | 0.432 | 0.012 | protein targeting to vacuole | c.97.1 | Cytidine deaminase-like |
| View | Download | 0.432 | 0.006 | protein targeting to vacuole | d.86.1 | Translation initiation factor eIF4e |
| View | Download | 0.423 | N/A | N/A | d.134.1 | Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 |
| View | Download | 0.403 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.397 | N/A | N/A | d.198.2 | Arp2/3 complex subunits |
| View | Download | 0.342 | N/A | N/A | a.69.1 | C-terminal domain of alpha and beta subunits of F1 ATP synthase |
| View | Download | 0.330 | N/A | N/A | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
| View | Download | 0.315 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.304 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.290 | N/A | N/A | f.31.1 | Photosystem I reaction center subunit XI, PsaL |
| View | Download | 0.286 | N/A | N/A | a.24.14 | FAT domain of focal adhesion kinase |
| View | Download | 0.275 | N/A | N/A | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.252 | N/A | N/A | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.244 | N/A | N/A | c.18.1 | DNA glycosylase |
| View | Download | 0.239 | N/A | N/A | c.66.1 | S-adenosyl-L-methionine-dependent methyltransferases |
| View | Download | 0.229 | N/A | N/A | d.58.39 | Glutamyl tRNA-reductase catalytic, N-terminal domain |
| View | Download | 0.228 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.221 | N/A | N/A | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.211 | N/A | N/A | d.110.4 | SNARE-like |
| View | Download | 0.209 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.207 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.201 | N/A | N/A | d.153.1 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) |
