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View Structure Prediction Details

Protein: ZIM17
Organism: Saccharomyces cerevisiae
Length: 205 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ZIM17.

Description E-value Query
Range
Subject
Range
ZIM17 - Heat shock protein with a zinc finger motif; essential for protein import into mitochondria; may act...
gi|207341980 - gi|207341980|gb|EDZ69887.1| YNL310Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|190409274 - gi|190409274|gb|EDV12539.1| hypothetical protein SCRG_03434 [Saccharomyces cerevisiae RM11-1a]
gi|151944239 - gi|151944239|gb|EDN62518.1| Zinc finger motif protein [Saccharomyces cerevisiae YJM789]
0.0 [1..205] [1..205]
DNLZ_MOUSE - DNL-type zinc finger protein OS=Mus musculus GN=Dnlz PE=1 SV=1
7.0E-31 [93..171] [66..146]
gi|12007332 - gi|12007332|gb|AAG45144.1|AF310897_2 unknown [Dictyostelium discoideum]
8.0E-30 [78..169] [81..181]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
2.0E-28 [96..172] [22..98]
YA72_SCHPO - Uncharacterized protein C24H6.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24H6...
SPAC24H6.02c - TIM23 translocase complex subunit Tim15
2.0E-28 [96..172] [72..148]
gi|24642261, gi|... - gi|7293113|gb|AAF48497.1| CG12379-PA [Drosophila melanogaster], gi|24642261|ref|NP_573061.1| CG12379...
3.0E-27 [100..174] [1..78]
gi|25404771, gi|... - gi|5734707|gb|AAD49972.1|AC008075_5 F24J5.3 [Arabidopsis thaliana], pir||A96712 probable transcripti...
6.0E-27 [79..154] [85..160]

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Predicted Domain #1
Region A:
Residues: [1-55]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGKVKERHV GFKGSAILKQ HRCNWNIKRL NMIPRTRTLL QSKIPITRYF ARCWA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [56-205]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRVRYNVCRT LPAAALHTNI IAHNEVKKDD KKVHLGSFKV DKPKMMIAFT CKKCNTRSSH  60
   61 TMSKQAYEKG TVLISCPHCK VRHLIADHLK IFHDHHVTVE QLMKANGEQV SQDVGDLEFE 120
  121 DIPDSLKDVL GKYAKNNSEN ASQLPHPSQK 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle