YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: STB1
Organism: Saccharomyces cerevisiae
Length: 459 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

No multiple sequence alignment data found for STB1.

Predicted Domain #1
Region A:
Residues: [1-95]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQEKKITIMK CRRNQKYHRK KEYVERYYFQ SVFPLCIQEM SQPQMSPEKE QELASKILHR  60
   61 AELAQMTRQL KLGLSNVPST KRKQDSTTKK RSGED

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 9.38
Match: 1l8mA
Description: No description for 1l8mA was found.

Predicted Domain #2
Region A:
Residues: [96-459]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AEDVDEDHKT LLEAISPAKK PLHDDTNKMT VISPVKFVEK PNTPPSSRQR KAEDRSQQIK  60
   61 PRKEDTPSTP RASATPIILP HASSHYQRPH DKNFMTPKRN NNNSSNHSNN NNNIKKKAAG 120
  121 SKDAPQDSDN TAGADLLMYL ATSPYNKSSH HGTPMAVRMP TTPRSYHYAS QLSLNGNTAS 180
  181 TSNDAVRFSH IKPSASSPQS TFKSNLLPNF PDESLMDSPS LYLSNNNGSV QATLSPQQRR 240
  241 KPTTNTLHPP SNVPTTPSRE LNGTNFNLLR TPNFNMGDYL HNLFSPSPRV PAQQGASNTS 300
  301 ASIPSVPAMV PGSSSNTSAI ATAAISSHTT NNFLDMNANG IPLIVGPGTD RIGEGESIDD 360
  361 KLTD

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 14.39
Match: 1k83A
Description: RBP1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle