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View Structure Prediction Details

Protein: KRI1
Organism: Saccharomyces cerevisiae
Length: 591 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KRI1.

Description E-value Query
Range
Subject
Range
gi|21752826 - gi|21752826|dbj|BAC04240.1| unnamed protein product [Homo sapiens]
480.0 [0..71] [555..60]
gi|76621795 - gi|76621795|ref|XP_588760.2| PREDICTED: similar to CG5645-PA [Bos taurus]
478.0 [0..57] [555..61]
gi|18204770, gi|... - gi|21703830|ref|NP_663391.1| KRI1 homolog [Mus musculus], gi|18204770|gb|AAH21438.1| KRI1 homolog (S...
451.0 [0..123] [555..1]
gi|73986943 - gi|73986943|ref|XP_542068.2| PREDICTED: similar to CG5645-PA [Canis familiaris]
446.0 [0..57] [547..25]

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Predicted Domain #1
Region A:
Residues: [1-121]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRKKSAAKR AREQAKKEAA VPATDTATIK TSETSATTVK PAIEASKSYV PSEDEEEDEE  60
   61 EEEEEDDYGE LITDEVENGI NQVLDAIKNN KTDKLLDPKV KFFEDPESAA AKLANREGKH 120
  121 K

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [122-591]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PIYLKDYHRM NILSGDALKE DDEEYEHATV DGKQSFVSQQ REEKTQLLNE IKSAFSDEEN  60
   61 EESSGDEDDG FLKKKEPSTK KEGKNLPDPT VNEENFLEEF VNQQAWIPKK GDKVISLDLN 120
  121 NNEEDDEEFE DAAEKFENAY NFRYEDPNAA EIISYARSQA TLRRSDDSSR RRKREEKRKI 180
  181 KEQIKAEKET ALQKKKTKKL NKLTDILEQL TKEYGAEINA DMVKKITDTL LKNDFKEEEW 240
  241 DNVVAELFNE EFYQQEGKPT WNEDDEIMGD FYADADGDDQ TEEGEVEKEQ KEEDEEEGPK 300
  301 RKKSKKEEKL QKKKEKRKVN ELVENALEQN KLALIEEVEK EEEERKSRSR TKEEQDLKFR 360
  361 YREVSPESFG LTAREIFAAD DTDLNEFIGL KKFAPYRSKE LRAKDKRKVM KARRLREWRK 420
  421 KTFKNENGLA PVEAEAGEKD EDTILIPVEK ASKSKHKRGH SHKHKGHQKK 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle