| Protein: | BNI1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1953 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BNI1.
| Description | E-value | Query Range |
Subject Range |
|
|
843.0 | [0..1] | [1953..1] |
|
|
511.0 | [0..410] | [1295..1733] |
|
|
400.0 | [0..409] | [1295..689] |
|
|
396.0 | [0..1165] | [1840..763] |
|
|
386.0 | [0..825] | [1832..176] |
|
|
378.0 | [0..825] | [1832..115] |
|
|
372.0 | [0..670] | [1952..593] |
|
Region A: Residues: [1-430] |
1 11 21 31 41 51
| | | | | |
1 MLKNSGSKHS NSKESHSNSS SGIFQNLKRL ANSNATNSNT GSPTYASQQQ HSPVGNEVST 60
61 SPASSSSFRK LNAPSRSTST EARPLNKKST LNTQNLSQYM NGKLSGDVPV SSQHARSHSM 120
121 QSKYSYSKRN SSQASNKLTR QHTGQSHSAS SLLSQGSLTN LSKFTTPDGK IYLEMPSDPY 180
181 EVEVLFEDIM YKRNIFQSLS EDKQEALMGY SIEKKWLIVK QDLQNELKKM RANTTSSSTA 240
241 SRTSMASDHH PILTANSSLS SPKSVLMTSA SSPTSTVYSN SLNHSTTLSS VGTSTSKGKK 300
301 LVSGSLKKQP SLNNIYRGGA ENNTSASTLP GDRTNRPPIH YVQRILADKL TSDEMKDLWV 360
361 TLRTEQLDWV DAFIDHQGHI AMANVLMNSI YKTAPRENLT KELLEKENSF FKCFRVLSML 420
421 SQGLYEFSTH
|
| Detection Method: |  |
| Confidence: | 42.09691 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [431-521] |
1 11 21 31 41 51
| | | | | |
1 RLMTDTVAEG LFSTKLATRK MATEIFVCML EKKNKSRFEA VLTSLDKKFR IGQNLHMIQN 60
61 FKKMPQYFSH LTLESHLKII QAWLFAVEQT L
|
| Detection Method: | |
| Confidence: | 10.69897 |
| Match: | 2mysA |
| Description: | Myosin S1 fragment, N-terminal domain; Myosin S1, motor domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [522-814] |
1 11 21 31 41 51
| | | | | |
1 DGRGKMGSLV GASDEFKNGG GENAILEYCQ WTMVFINHLC SCSDNINQRM LLRTKLENCG 60
61 ILRIMNKIKL LDYDKVIDQI ELYDNNKLDD FNVKLEANNK AFNVDLHDPL SLLKNLWDIC 120
121 KGTENEKLLV SLVQHLFLSS SKLIEENQNS SKLTKQLKLM DSLVTNVSVA STSDEETNMN 180
181 MAIQRLYDAM QTDEVARRAI LESRALTKKL EEIQAERDSL SEKLSKAEHG LVGQLEDELH 240
241 ERDRILAKNQ RVMQQLEAEL EELKKKHLLE KHQQEVELRK MLTILNSRPE ESF
|
| Detection Method: | |
| Confidence: | 8.0 |
| Match: | 1c1gA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [815-1263] |
1 11 21 31 41 51
| | | | | |
1 NKNEGTRGMN SSLNSSEKAN IQKVLQDGLS RAKKDYKDDS KKFGMTLQPN KRLKMLRMQM 60
61 ENIENEARQL EMTNFAEFEK DRLEPPIHIK KPKVKKMKNK DRKPLVKPQE ADVNKLNDLR 120
121 RALTEIQMES NDISKFNVEE RVNELFNEKK SLALKRLKEL ETKYKGFGID FNVDEIMDSP 180
181 KKNTGDVETE EDANYASLDP KTYQKKLDEI NRITDQLLDI QTQTEHEIQV EEDGESDLSS 240
241 SSSDDESEEI YQDASPTQEL RSEHSELSSG SGPGSFLDAL SQKYGTGQNV TASAAFGENN 300
301 NGSGIGPLHS KVEKTFMNRL RKSTVSSAPY LEELTQKVNK VEPYEQNEDE GLDKKSLPEN 360
361 STASAASAFD KAEKDMRQHV ENGKQGRVVN HEEDKTADFS AVSKLNNTDG AEDLSTQSSV 420
421 LSSQPPPPPP PPPPVPAKLF GESLEKEKK
|
| Detection Method: | |
| Confidence: | 1.02 |
| Match: | 1yvlA |
| Description: | Structure of Unphosphorylated STAT1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1264-1341] |
1 11 21 31 41 51
| | | | | |
1 SEDDTVKQET TGDSPAPPPP PPPPPPPPMA LFGKPKGETP PPPPLPSVLS SSTDGVIPPA 60
61 PPMMPASQIK SAVTSPLL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1342-1825] |
1 11 21 31 41 51
| | | | | |
1 PQSPSLFEKY PRPHKKLKQL HWEKLDCTDN SIWGTGKAEK FADDLYEKGV LADLEKAFAA 60
61 REIKSLASKR KEDLQKITFL SRDISQQFGI NLHMYSSLSV ADLVKKILNC DRDFLQTPSV 120
121 VEFLSKSEII EVSVNLARNY APYSTDWEGV RNLEDAKPPE KDPNDLQRAD QIYLQLMVNL 180
181 ESYWGSRMRA LTVVTSYERE YNELLAKLRK VDKAVSALQE SDNLRNVFNV ILAVGNFMND 240
241 TSKQAQGFKL STLQRLTFIK DTTNSMTFLN YVEKIVRLNY PSFNDFLSEL EPVLDVVKVS 300
301 IEQLVNDCKD FSQSIVNVER SVEIGNLSDS SKFHPLDKVL IKTLPVLPEA RKKGDLLEDE 360
361 VKLTIMEFES LMHTYGEDSG DKFAKISFFK KFADFINEYK KAQAQNLAAE EEERLYIKHK 420
421 KIVEEQQKRA QEKEKQKENS NSPSSEGNEE DEAEDRRAVM DKLLEQLKNA GPAKSDPSSA 480
481 RKRA
|
| Detection Method: | |
| Confidence: | 94.30103 |
| Match: | 1y64B |
| Description: | Bni1p Formin Homology 2 Domain complexed with ATP-actin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1826-1953] |
1 11 21 31 41 51
| | | | | |
1 LVRKKYLSEK DNAPQLLNDL DTEEGSILYS PEAMDPTADT VIHAESPTPL ATRGVMNTSE 60
61 DLPSPSKTSA LEDQEEISDR ARMLLKELRG SDTPVKQNSI LDEHLEKLRA RKERSIGEAS 120
121 TGNRLSFK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.415 | c.95.1 | Thiolase-like |
| View | Download | 0.388 | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.388 | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.351 | a.74.1 | Cyclin-like |
| View | Download | 0.317 | a.118.8 | TPR-like |
| View | Download | 0.312 | a.39.2 | Insect pheromon/odorant-binding proteins |
| View | Download | 0.312 | a.39.2 | Insect pheromon/odorant-binding proteins |
| View | Download | 0.302 | a.74.1 | Cyclin-like |
| View | Download | 0.294 | a.142.1 | PTS-regulatory domain, PRD |
