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View Structure Prediction Details

Protein: PIK1
Organism: Saccharomyces cerevisiae
Length: 1066 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PIK1.

Description E-value Query
Range
Subject
Range
PIK1 - Phosphatidylinositol 4-kinase; catalyzes first step in the biosynthesis of phosphatidylinositol-4,5-...
PIK1_YEAST - Phosphatidylinositol 4-kinase PIK1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PIK1 ...
gi|190409236 - gi|190409236|gb|EDV12501.1| phosphatidylinositol 4-kinase [Saccharomyces cerevisiae RM11-1a]
0.0 [1..1066] [1..1066]
PIK1_CANAL - Phosphatidylinositol 4-kinase PIK1alpha OS=Candida albicans GN=PIKALPHA PE=3 SV=1
PIK1_CANAL - Phosphatidylinositol 4-kinase PIK1alpha OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PIKAL...
0.0 [11..1066] [2..977]
P4KB1_ARATH - Phosphatidylinositol 4-kinase beta 1 OS=Arabidopsis thaliana GN=PI4KB1 PE=1 SV=1
0.0 [10..1064] [24..1120]
PRKDC - protein kinase, DNA-activated, catalytic polypeptide
0.0 [276..1019] [3179..4023]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
0.0 [276..1019] [3178..3991]

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Predicted Domain #1
Region A:
Residues: [1-121]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHKASSSKKS FDDTIELKKN EQLLKLINSS EFTLHNCVEL LCKHSENIGI HYYLCQKLAT  60
   61 FPHSELQFYI PQLVQVLVTM ETESMALEDL LLRLRAENPH FALLTFWQLQ ALLTDLSTDP 120
  121 A

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.554 0.170 ascospore formation a.118.1 ARM repeat
View Download 0.597 0.021 ascospore formation a.85.1 Hemocyanin, N-terminal domain
View Download 0.674 0.008 ascospore formation a.118.11 Cytochrome c oxidase subunit E
View Download 0.524 0.006 ascospore formation a.60.5 Barrier-to-autointegration factor, BAF
View Download 0.674 N/A N/A a.118.11 Cytochrome c oxidase subunit E
View Download 0.620 N/A N/A a.118.11 Cytochrome c oxidase subunit E
View Download 0.597 N/A N/A a.85.1 Hemocyanin, N-terminal domain
View Download 0.554 N/A N/A a.118.1 ARM repeat
View Download 0.524 N/A N/A a.60.5 Barrier-to-autointegration factor, BAF
View Download 0.517 N/A N/A a.118.1 ARM repeat
View Download 0.490 N/A N/A a.4.5 "Winged helix" DNA-binding domain
View Download 0.459 N/A N/A a.118.9 ENTH/VHS domain
View Download 0.422 N/A N/A a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.406 N/A N/A a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.406 N/A N/A a.85.1 Hemocyanin, N-terminal domain
View Download 0.382 N/A N/A a.78.1 Fatty acid responsive transcription factor FadR, C-terminal domain
View Download 0.378 N/A N/A a.95.1 Influenza virus matrix protein M1
View Download 0.377 N/A N/A a.118.9 ENTH/VHS domain
View Download 0.366 N/A N/A a.22.1 Histone-fold
View Download 0.359 N/A N/A d.87.1 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
View Download 0.355 N/A N/A a.3.1 Cytochrome c
View Download 0.339 N/A N/A a.118.13 Arp2/3 complex 16 kDa subunit ARPC5
View Download 0.335 N/A N/A d.110.4 SNARE-like
View Download 0.333 N/A N/A d.14.1 Ribosomal protein S5 domain 2-like
View Download 0.331 N/A N/A a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
View Download 0.331 N/A N/A a.118.8 TPR-like
View Download 0.328 N/A N/A d.58.39 Glutamyl tRNA-reductase catalytic, N-terminal domain
View Download 0.320 N/A N/A a.79.1 Antitermination factor NusB
View Download 0.315 N/A N/A a.118.8 TPR-like
View Download 0.301 N/A N/A a.1.1 Globin-like
View Download 0.294 N/A N/A a.118.18 Cysteine rich protein B (HcpB)
View Download 0.293 N/A N/A a.74.1 Cyclin-like
View Download 0.286 N/A N/A a.1.1 Globin-like
View Download 0.280 N/A N/A d.54.1 Enolase N-terminal domain-like
View Download 0.278 N/A N/A a.18.1 T4 endonuclease V
View Download 0.273 N/A N/A f.1.4 Bcl-2 inhibitors of programmed cell death
View Download 0.268 N/A N/A a.23.2 Diol dehydratase, gamma subunit
View Download 0.267 N/A N/A d.224.1 SufE-like
View Download 0.263 N/A N/A d.74.4 Prokaryotic AspRS, insert domain
View Download 0.262 N/A N/A a.70.1 N-terminal domain of the delta subunit of the F1F0-ATP synthase
View Download 0.260 N/A N/A a.84.1 Scaffolding protein gpD of bacteriophage procapsid
View Download 0.249 N/A N/A f.1.4 Bcl-2 inhibitors of programmed cell death
View Download 0.247 N/A N/A a.1.1 Globin-like
View Download 0.244 N/A N/A c.45.1 (Phosphotyrosine protein) phosphatases II
View Download 0.239 N/A N/A a.118.1 ARM repeat
View Download 0.238 N/A N/A a.118.12 Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain
View Download 0.235 N/A N/A b.81.1 Trimeric LpxA-like enzymes
View Download 0.234 N/A N/A a.60.8 HRDC-like
View Download 0.233 N/A N/A a.65.1 Annexin
View Download 0.232 N/A N/A a.118.8 TPR-like
View Download 0.228 N/A N/A a.118.1 ARM repeat
View Download 0.227 N/A N/A a.73.1 Retrovirus capsid protein, N-terminal core domain
View Download 0.223 N/A N/A a.118.9 ENTH/VHS domain
View Download 0.219 N/A N/A d.108.1 Acyl-CoA N-acyltransferases (Nat)
View Download 0.217 N/A N/A d.51.1 Eukaryotic type KH-domain (KH-domain type I)
View Download 0.214 N/A N/A a.60.13 Putative methyltransferase TM0872, insert domain
View Download 0.212 N/A N/A a.73.1 Retrovirus capsid protein, N-terminal core domain
View Download 0.210 N/A N/A a.77.1 DEATH domain
View Download 0.209 N/A N/A a.46.1 Methionine synthase domain
View Download 0.204 N/A N/A c.64.1 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
View Download 0.201 N/A N/A a.72.1 Functional domain of the splicing factor Prp18

Predicted Domain #2
Region A:
Residues: [122-434]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SYGFQVARRV LNNLQTNLFN TSSGSDKNVK IHENVAPALV LSSMIMSAIA FPQLSEVTKP  60
   61 LVESQGRRQK AFVFKLARSA MKDFTKNMTL KNTLLNKKTS RSKRVSSNRS STPTSPIDLI 120
  121 DPIKTKEDAS FRKSRHSEVK LDFDIVDDIG NQVFEERISS SIKLPKRKPK YLDNSYVHRT 180
  181 YDGKNINRDG SISNTAKALD GNKGDYISPK GRNDENNEIG NNEDETGGET EEDADALNSD 240
  241 HFTSSMPDLH NIQPRTSSAS SASLEGTPKL NRTNSQPLSR QAFKNSKKAN SSLSQEIDLS 300
  301 QLSTTSKIKM LKA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [435-692]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NYFRCETQFA IALETISQRL ARVPTEARLS ALRAELFLLN RDLPAEVDIP TLLPPNKKGK  60
   61 LHKLVTITAN EAQVLNSAEK VPYLLLIEYL RDEFDFDPTS ETNERLLKKI SGNQGGLIFD 120
  121 LNYMNRKENN ENRNESTLTS NNTRSSVYDS NSFNNGASRN EGLSSTSRSD SASTAHVRTE 180
  181 VNKEEDLGDM SMVKVRNRTD DEAYRNALVI QSAANVPILP DDSQDRSPEL NFGSNLDEVL 240
  241 IENGINSKNI HSQTDALA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 319.9897
Match: 1e8yA_
Description: Phoshoinositide 3-kinase (PI3K) helical domain; Phoshoinositide 3-kinase (PI3K); Phoshoinositide 3-kinase (PI3K), catalytic domain
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [693-846]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DQMRVSAVML AQLDKSPQQL SESTKQIRAQ IISSMKEVQD KFGYHDLEAL HGMAGERKLE  60
   61 NDLMTGGIDT SYLGEDWATK KERIRKTSEY GHFENWDLCS VIAKTGDDLR QEAFAYQMIQ 120
  121 AMANIWVKEK VDVWVKRMKI LITSANTGLV ETIT

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [989-1019]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KYADQIVSMC EIMQKDNMQP CFDAGEQTSV Q

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 319.9897
Match: 1e8yA_
Description: Phoshoinositide 3-kinase (PI3K) helical domain; Phoshoinositide 3-kinase (PI3K); Phoshoinositide 3-kinase (PI3K), catalytic domain
Matching Structure (courtesy of the PDB):

Predicted Domain #5
Region A:
Residues: [847-988]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NAMSVHSIKK ALTKKMIEDA ELDDKGGIAS LNDHFLRAFG NPNGFKYRRA QDNFASSLAA  60
   61 YSVICYLLQV KDRHNGNIMI DNEGHVSHID FGFMLSNSPG SVGFEAAPFK LTYEYIELLG 120
  121 GVEGEAFKKF VELTKSSFKA LR

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [1020-1066]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRQRFQLDLS EKEVDDFVEN FLIGKSLGSI YTRIYDQFQL ITQGIYS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 319.9897
Match: 1e8yA_
Description: Phoshoinositide 3-kinase (PI3K) helical domain; Phoshoinositide 3-kinase (PI3K); Phoshoinositide 3-kinase (PI3K), catalytic domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle