| Protein: | GIS2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 153 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GIS2.
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-59 | [21..143] | [346..468] |
|
|
6.0E-59 | [21..143] | [344..466] |
|
Region A: Residues: [1-52] |
1 11 21 31 41 51
| | | | | |
1 MSQKACYVCG KIGHLAEDCD SERLCYNCNK PGHVQTDCTM PRTVEFKQCY NC
|
| Detection Method: |  |
| Confidence: | 11.30103 |
| Match: | 1baj__ |
| Description: | HIV capsid protein, dimerisation domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [53-153] |
1 11 21 31 41 51
| | | | | |
1 GETGHVRSEC TVQRCFNCNQ TGHISRECPE PKKTSRFSKV SCYKCGGPNH MAKDCMKEDG 60
61 ISGLKCYTCG QAGHMSRDCQ NDRLCYNCNE TGHISKDCPK A
|
| Detection Method: | |
| Confidence: | 35.980454 |
| Match: | 1aaf__ |
| Description: | HIV nucleocapsid |
Matching Structure (courtesy of the PDB): |
|
