| Protein: | RPA49 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 415 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPA49.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..415] | [1..415] |
|
|
0.0 | [17..415] | [34..430] |
|
|
0.0 | [17..415] | [34..430] |
|
|
0.0 | [19..415] | [21..415] |
|
|
0.0 | [21..413] | [35..424] |
|
|
3.0E-92 | [17..414] | [58..442] |
|
|
9.0E-91 | [9..415] | [4..383] |
|
Region A: Residues: [1-415] |
1 11 21 31 41 51
| | | | | |
1 MSVKRSVSEI EIESVQDQPS VAVGSFFKGF RAPSDTTFDL YKKKKSEKDE FVLHGENERL 60
61 EYEGYTDSSS QASNQYVVGL FNPEKKSIQL YKAPVLVSKV VSKSSKNLRG PKIKSKSDTR 120
121 PSALRNALGE AFGTKKAKKA IADLERNRID SDKLTDSAID IVDSVRTASK DLPTRAQLDE 180
181 ITSNDRPTPL ANIDATDVEQ IYPIESIIPK KELQFIRVSS ILKEADKEKK LELFPYQNNS 240
241 KYVAKKLDSL TQPSQMTKLQ LLYYLSLLLG VYENRRVNNK TKLLERLNSP PEILVDGILS 300
301 RFTVIKPGQF GRSKDRSYFI DPQNEDKILC YILAIIMHLD NFIVEITPLA HELNLKPSKV 360
361 VSLFRVLGAI VKGATVAQAE AFGIPKSTAA SYKIATMKVP FKLPEMTRRG RGPRR
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
