| Protein: | CNM67 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 581 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CNM67.
| Description | E-value | Query Range |
Subject Range |
|
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6.0E-69 | [6..576] | [798..1378] |
|
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1.0E-67 | [6..576] | [803..1383] |
|
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2.0E-67 | [6..576] | [12..592] |
|
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2.0E-67 | [6..576] | [801..1381] |
|
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3.0E-67 | [6..576] | [796..1376] |
|
Region A: Residues: [1-357] |
1 11 21 31 41 51
| | | | | |
1 MTDFDLMNFP FHERLDSPVS ENGEIKDGEP IPQNWLNENH VGKSILPLFV NPEDVINCNF 60
61 SNARDSYEEN KSPSMDQMNY ARNTSYQESP GLQERPKNEK DKSPIGTDVH KKDVPNFIHS 120
121 TPRENSSKHF TRANEQASAQ PTDEHTSPDI SIEDCNGAKI FLQNSLSKED FRMLENVILG 180
181 YQKKVIELGR DNLRQEERAN SLQKELEAAT KSNDKTLDNK KKIEEQTVLI ENLTKDLSLN 240
241 KEMLEKANDT IQTKHTALLS LTDSLRKAEL FEIPIGILFF DLYDSEENSS KLDHILQEKY 300
301 PNIKGFLCAS QQEELSRISQ RFKNAKAEAE DLRNELENKK IEIQTMREKN NTLIGTN
|
| Detection Method: |  |
| Confidence: | 30.30103 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [358-464] |
1 11 21 31 41 51
| | | | | |
1 KTLSKQNKIL CDKFDKLTID EKEILKGCNE EIKIKLERLN ERLGSWEKSK EKYETSLKDK 60
61 EKMLADAEKK TNTLSKELDN LRSRFGNLEG NTSERITIKN ILQSRPD
|
| Detection Method: | |
| Confidence: | 12.045757 |
| Match: | 1c1gA_ |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [465-581] |
1 11 21 31 41 51
| | | | | |
1 ISAEECNFLM VEQIDSANLT TLQNTVKEIV LAVGIPYPKL RRKIPLLAIK LKYENIMLSN 60
61 FAQRLHRQVY SQEMNLKKFT DQAYYDFMST RRMDSIDHHL ERCLDHLYDH ILEKMVK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.534 | 0.118 | microtubule nucleation | a.74.1 | Cyclin-like |
| View | Download | 0.396 | 0.114 | microtubule nucleation | a.21.1 | HMG-box |
| View | Download | 0.381 | 0.076 | microtubule nucleation | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.374 | N/A | N/A | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.361 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.359 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.336 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.319 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.312 | N/A | N/A | d.56.1 | GroEL-intermediate domain like |
| View | Download | 0.290 | N/A | N/A | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.276 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.274 | N/A | N/A | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.274 | N/A | N/A | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.265 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.258 | N/A | N/A | c.51.2 | TolB, N-terminal domain |
| View | Download | 0.257 | N/A | N/A | a.70.1 | N-terminal domain of the delta subunit of the F1F0-ATP synthase |
| View | Download | 0.246 | N/A | N/A | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.245 | N/A | N/A | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.243 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.236 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.234 | N/A | N/A | d.236.1 | DNA-binding protein Tfx |
| View | Download | 0.233 | N/A | N/A | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.230 | N/A | N/A | a.69.3 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
| View | Download | 0.227 | N/A | N/A | a.91.1 | Regulator of G-protein signalling, RGS |
| View | Download | 0.226 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.225 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.220 | N/A | N/A | a.91.1 | Regulator of G-protein signalling, RGS |
| View | Download | 0.213 | N/A | N/A | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.202 | N/A | N/A | d.15.1 | Ubiquitin-like |
| View | Download | 0.201 | N/A | N/A | a.64.1 | Saposin |
