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View Structure Prediction Details

Protein: YNL211C
Organism: Saccharomyces cerevisiae
Length: 86 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YNL211C.

Description E-value Query
Range
Subject
Range
gi|49527746 - gi|49527746|emb|CAG61395.1| unnamed protein product [Candida glabrata]
gi|50292003, gi|... - gi|50292003|ref|XP_448434.1| unnamed protein product [Candida glabrata], gi|49527746|emb|CAG61395.1|...
93.0 [0..2] [78..3]
gi|50307835, gi|... - gi|50307835|ref|XP_453911.1| unnamed protein product [Kluyveromyces lactis], gi|49643045|emb|CAH0100...
gi|49643045 - gi|49643045|emb|CAH01007.1| KLLA0D19140p [Kluyveromyces lactis]
82.0 [0..3] [85..5]
gi|44980697 - gi|44980697|gb|AAS50602.1| ABL169Wp [Ashbya gossypii ATCC 10895]
gi|45185061, gi|... - gi|45185061|ref|NP_982778.1| ABL169Wp [Ashbya gossypii ATCC 10895], gi|44980697|gb|AAS50602.1| ABL16...
63.0 [0..3] [77..5]
gi|49653757|emb|... - unnamed protein product [Debaryomyces hansenii CBS767]
gi|50419137, gi|... - gi|50419137|ref|XP_458091.1| hypothetical protein DEHA0C10395g [Debaryomyces hansenii CBS767], gi|49...
59.0 [0..2] [78..4]

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Predicted Domain #1
Region A:
Residues: [1-86]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPRSIEEWF YYKLLSSPGF HRFVRKVYRK VNGIKEDPFT DQSTAFQYLY KPTPRQKFKA  60
   61 LRLLFWDEMR STFGFRRRLG DRFKKD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.751 a.76.1 Iron-dependent represor protein, dimerization domain
View Download 0.744 a.1.1 Globin-like
View Download 0.744 a.1.1 Globin-like
View Download 0.743 a.76.1 Iron-dependent represor protein, dimerization domain
View Download 0.718 a.1.1 Globin-like
View Download 0.711 a.77.1 DEATH domain
View Download 0.631 a.77.1 DEATH domain
View Download 0.599 d.52.5 Probable GTPase Der, C-terminal domain
View Download 0.599 d.52.5 Probable GTPase Der, C-terminal domain
View Download 0.522 d.228.1 Replication modulator SeqA, C-terminal DNA-binding domain
View Download 0.434 d.52.5 Probable GTPase Der, C-terminal domain
View Download 0.394 d.58.7 RNA-binding domain, RBD
View Download 0.381 d.45.1 ClpS-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle