| Protein: | PSY2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 858 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PSY2.
| Description | E-value | Query Range |
Subject Range |
|
|
851.0 | [0..23] | [714..231] |
|
|
831.0 | [0..23] | [714..100] |
|
|
819.0 | [0..24] | [714..172] |
|
|
816.0 | [0..21] | [714..26] |
|
|
804.0 | [0..24] | [714..1] |
|
|
804.0 | [0..24] | [714..1] |
|
|
803.0 | [0..24] | [714..1] |
|
Region A: Residues: [1-162] |
1 11 21 31 41 51
| | | | | |
1 MSLPGTPTTS PTPMDEDTEQ AVSVNTEPKR VKVYILENNE WKDTGTGFCI GEVDEGKFAY 60
61 LVVSDEDSPT ETLLKSKLEG NIEYQRQEET LIVWKDLGGK DIALSFEESM GCDTLCEFIV 120
121 HVQRNIESNI SLVTVKSSDN GLGSVHDIIT GPVTLPSNDQ QQ
|
| Detection Method: |  |
| Confidence: | 7.92 |
| Match: | |
| Description: | No description for 1i2hA was found. |
|
Region A: Residues: [163-241] |
1 11 21 31 41 51
| | | | | |
1 NSQTLLEALK ILNENTSFDF LKNETIEFIL QSNYIDTLIS HFHKAEEEKI PKDLFLLSNI 60
61 IKTLILYNKR DILESMVED
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.869 | a.50.1 | Anaphylotoxins (complement system) |
| View | Download | 0.855 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.846 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.836 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.836 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.801 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.780 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.705 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
|
Region A: Residues: [242-534] |
1 11 21 31 41 51
| | | | | |
1 DRIMGIVGIL EYDTEYPTSK ANHRKYLGSK GPNFKEVIPL ENEDLKIIMK KCFRLQFLKD 60
61 VVLVRFLDDH NFNLISEIVM DLETCIIDFL QVGTFLDRLI ELYDTKTLPE SSSEKEKFVQ 120
121 KRKDGIRLLQ QCVQMSINLD AVDRSKFYKT LVRKGLFKVL DYAFHMETDS NVRILATDTI 180
181 ITIIEHDILL IHNVQNEDSF KRQHKSAPDD KSSHRKYPQD YSSSTDSKLL LILSTILLSD 240
241 RSPGLREQVV QALNTLLHPE GCVGNGEGSY DLMGRSNYEA KNTSEDFPSF SYG
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [535-599] |
1 11 21 31 41 51
| | | | | |
1 LNSDSINLNN YHYSSDEMNN LEPESESEFQ VMEYFANFYN KIAPILFGPL IKKDITTEMA 60
61 EIDGQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.633 | a.64.1 | Saposin |
| View | Download | 0.624 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.430 | b.36.1 | PDZ domain-like |
| View | Download | 0.388 | d.87.1 | FAD/NAD-linked reductases, dimerisation (C-terminal) domain |
|
Region A: Residues: [600-718] |
1 11 21 31 41 51
| | | | | |
1 IEKVTKDDLL LIHLVKLVSF VCTEHDRVLS RRFILENGIL DSVSKLIGGN HMMQLRLTAV 60
61 RCIKNLMCLD DKYYHRYMIS KNLYAPVFKL FQENIDKNNL ANSCIQDFFR IIITECRAY
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.972 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.898 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.842 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.842 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.839 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.830 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.829 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.766 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.722 | N/A | N/A | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
| View | Download | 0.703 | N/A | N/A | a.1.1 | Globin-like |
|
Region A: Residues: [719-858] |
1 11 21 31 41 51
| | | | | |
1 QSDGHNRKEK TNGSYDGNGN DVKTNVNNNR TNFTILNKYL VQTYGDVLRK ATDIPFIQDM 60
61 LETGEENQPD HSSFENSIEG GNDISVNMST DGFASNHLED IDIKNVKRLH SEIEHFENDP 120
121 HYSGDQLAFK KSVDQMNAST
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
