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View Structure Prediction Details

Protein: YNL179C
Organism: Saccharomyces cerevisiae
Length: 145 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YNL179C.

Predicted Domain #1
Region A:
Residues: [1-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNCRRLLCR QLSSAYLNYL PFYFLIYRPF SLYLSSCEYW QSCFSFFFLF FLFFFFFFTF  60
   61 QFLVAFPILL FKVSLNSTLT KHVRPIHQRT KARSLTHHCI PKRWNIHFFF SGLLHKTISR 120
  121 IFSWIGNTRQ VAPTKHTPKY LLNTI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.894 a.216.1 Description not found.
View Download 0.861 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.861 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.859 a.24.18 Description not found.
View Download 0.842 a.246.1 Description not found.
View Download 0.732 a.29.13 Description not found.
View Download 0.675 a.19.1 Fertilization protein
View Download 0.673 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.611 a.19.1 Fertilization protein


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle