| Protein: | TDA7 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 636 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TDA7.
| Description | E-value | Query Range |
Subject Range |
|
|
7.0E-69 | [15..474] | [543..998] |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MNSNSTIGRT TLGESDTISL SFSEPSSSLN SRSTDVVFAS TSTLVPQQGS LTSLPPVSST 60
61 ATPTYYSTSL TYDETL
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.441 | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.475 | a.28.1 | ACP-like |
| View | Download | 0.521 | d.10.1 | DNA-binding domain |
| View | Download | 0.642 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.372 | d.42.1 | POZ domain |
| View | Download | 0.363 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.349 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.348 | b.43.4 | Riboflavin synthase domain-like |
| View | Download | 0.336 | b.82.1 | RmlC-like cupins |
| View | Download | 0.326 | d.95.2 | Homing endonucleases |
| View | Download | 0.282 | d.94.1 | HPr-like |
| View | Download | 0.257 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.249 | d.82.1 | Copper amine oxidase, domain N |
| View | Download | 0.216 | b.13.3 | Description not found. |
|
Region A: Residues: [77-215] |
1 11 21 31 41 51
| | | | | |
1 HTSIDVSSTS TLVSSTDSSS SSEQDTYSSQ YDPATSSYSI ITPSMSIFSS TSPMSSSSSI 60
61 TSEWSSLTST TPTLSSSATS LSSSWSSLSS PSSLLVSSSL SLSLSSSYSD TKLFSFDSRS 120
121 SIFSPSTPTV ISPSYTYLS
|
|
Region B: Residues: [298-309] |
1 11 21 31 41 51
| | | | | |
1 VPTSSSVSSS SS
|
| Detection Method: | |
| Confidence: | 8.14 |
| Match: | 1mvmA |
| Description: | Parvovirus (panleukopenia virus) capsid protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [216-297] |
1 11 21 31 41 51
| | | | | |
1 SISATSFQIS TTSELSSSWF STISSPSTIS NKDTTCPSSS RNTSTSFYSS SLSSTNDFST 60
61 ISKSSKLSPS ASSSTVSIST IS
|
|
Region B: Residues: [310-400] |
1 11 21 31 41 51
| | | | | |
1 KVPSNRPSSS SSSDDTTSAY SSTYTFQSLQ STTSSSIPPT TQTPSTSTIS TSPIPTSSQV 60
61 FNTVAISSSE DSKTIYYFYT QTYDITDSST T
|
| Detection Method: | |
| Confidence: | 8.14 |
| Match: | 1mvmA |
| Description: | Parvovirus (panleukopenia virus) capsid protein |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [401-535] |
1 11 21 31 41 51
| | | | | |
1 FVTGLPTTIA VAKSEVTSFS APSSTITADM SFYQHWLDGS LDNNKNQGTS KTNTGTIVGS 60
61 VVGSVGGILI CVLVVWFMLV RKRKAKRHFK ENDSFCHEIG RRTGFPTTAQ AKEASLQAQD 120
121 SGSQQRNTET ASANN
|
| Detection Method: | |
| Confidence: | 13.25 |
| Match: | 1ei3A |
| Description: | Fibrinogen |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [536-636] |
1 11 21 31 41 51
| | | | | |
1 PFSNEFNFKA RGNPPPVPPP RNVTAMNGSF QNMRSNFMDQ ENRFSYGSSF TYSSLGSSTQ 60
61 GGFSTLSSNS IRLGRGLDND ISHDERNTVQ NNSQGFLREI I
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.372 | a.3.1 | Cytochrome c |
| View | Download | 0.428 | a.74.1 | Cyclin-like |
| View | Download | 0.234 | a.77.1 | DEATH domain |
| View | Download | 0.288 | c.78.2 | Aspartate/glutamate racemase |
| View | Download | 0.381 | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
| View | Download | 0.223 | d.15.1 | Ubiquitin-like |
| View | Download | 0.221 | a.3.1 | Cytochrome c |
| View | Download | 0.220 | a.90.1 | Transcription factor STAT-4 N-domain |
| View | Download | 0.206 | c.51.1 | Anticodon-binding domain of Class II aaRS |
