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View Structure Prediction Details

Protein: YNL171C
Organism: Saccharomyces cerevisiae
Length: 122 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YNL171C.

Predicted Domain #1
Region A:
Residues: [1-122]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCTPFINQV IHKDYTLPQF WNLLKLVLDT QINILEFCII HHVVQSFCTT IRVGNPKYLH  60
   61 CFYLNTANLN YKILNPLMLY YFLHSKEYRV PPLSNLEYPN FQPVAKRWYF LVHFLGLILN 120
  121 NF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.707 a.24.3 Cytochromes
View Download 0.690 a.24.3 Cytochromes
View Download 0.657 a.24.3 Cytochromes
View Download 0.604 a.24.3 Cytochromes
View Download 0.604 a.24.3 Cytochromes
View Download 0.532 a.24.3 Cytochromes
View Download 0.439 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.434 a.24.10 Histidine-containing phosphotransfer domain, HPT domain
View Download 0.420 a.24.3 Cytochromes


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle