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View Structure Prediction Details

Protein: PGA1
Organism: Saccharomyces cerevisiae
Length: 198 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PGA1.

Description E-value Query
Range
Subject
Range
gi|190409143 - gi|190409143|gb|EDV12408.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
gi|207341788 - gi|207341788|gb|EDZ69746.1| YNL158Wp-like protein [Saccharomyces cerevisiae AWRI1631]
PGA1 - Essential component of GPI-mannosyltransferase II, responsible for second mannose addition to GPI pr...
PGA1_YEAST - GPI mannosyltransferase 2 subunit PGA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=P...
gi|151944380 - gi|151944380|gb|EDN62658.1| processing of gas1p and alp [Saccharomyces cerevisiae YJM789]
0.0 [1..198] [1..198]

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Predicted Domain #1
Region A:
Residues: [1-198]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRPQNVHWF IATIVFFIGF VHANTESILY KVPHNFPLKK PRDSSTYARD VNLISSISLS  60
   61 GEAMSQITIE ANTTDLELHN TTYIELADLQ RDETYQIKVC WSAIHPISIN NLQTITIPRF 120
  121 TEFQGTKSDY ARILVTFQVL SDSYPSEHAM VPIQVSLITT RLGIPVDIYP TLIVMVLLVA 180
  181 GLVVTRAPHV LNDLLLKF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle