| Protein: | GIM3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 129 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GIM3.
| Description | E-value | Query Range |
Subject Range |
|
|
6.0E-33 | [4..128] | [1..124] |
|
|
1.0E-32 | [3..128] | [2..128] |
|
|
4.0E-32 | [4..128] | [1..126] |
|
|
6.0E-32 | [4..128] | [1..124] |
|
|
9.0E-32 | [1..129] | [1..129] |
|
|
1.0E-30 | [4..128] | [1..126] |
|
Region A: Residues: [1-129] |
1 11 21 31 41 51
| | | | | |
1 MELLPQGQRN NTQVTFEDQQ KINEFSKLIM RKDAIAQELS LQREEKEYLD DVSLEIELID 60
61 EDEPVQYKVG DLFIFMKQSK VTAQLEKDAE RLDNKIETLE DKQRDIDSRL DALKAILYAK 120
121 FGDNINLER
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.695 | a.1.1 | Globin-like |
| View | Download | 0.647 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.533 | a.1.1 | Globin-like |
| View | Download | 0.486 | a.118.8 | TPR-like |
| View | Download | 0.476 | a.1.1 | Globin-like |
| View | Download | 0.413 | a.1.1 | Globin-like |
| View | Download | 0.381 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.294 | f.1.1 | Colicin |
| View | Download | 0.292 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.288 | d.110.4 | SNARE-like |
| View | Download | 0.288 | d.110.4 | SNARE-like |
| View | Download | 0.285 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.281 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.274 | a.63.1 | Apolipophorin-III |
| View | Download | 0.273 | a.1.1 | Globin-like |
| View | Download | 0.265 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.263 | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.258 | d.153.1 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) |
| View | Download | 0.254 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.254 | d.110.4 | SNARE-like |
| View | Download | 0.241 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.237 | a.59.1 | PAH2 domain |
| View | Download | 0.237 | d.96.1 | Tetrahydrobiopterin biosynthesis enzymes-like |
| View | Download | 0.228 | a.46.1 | Methionine synthase domain |
| View | Download | 0.219 | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.217 | d.111.1 | PR-1-like |
| View | Download | 0.212 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.207 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.207 | a.47.2 | t-snare proteins |
| View | Download | 0.202 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.201 | a.4.5 | "Winged helix" DNA-binding domain |
