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View Structure Prediction Details

Protein: YNL144C
Organism: Saccharomyces cerevisiae
Length: 740 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YNL144C.

Description E-value Query
Range
Subject
Range
gi|207341777 - gi|207341777|gb|EDZ69739.1| YNL144Cp-like protein [Saccharomyces cerevisiae AWRI1631]
YNL144C - Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purifi...
YNO4_YEAST - Uncharacterized protein YNL144C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YNL144C ...
0.0 [1..740] [1..740]

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Predicted Domain #1
Region A:
Residues: [1-363]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSIFEMTI DHDGMDSTGL KLSQTASSIS MGDEFLCSST TSNSILDSPL PKVTFNHIDS  60
   61 ITDINTNIMN EIVEPQSGVD VDVADKNVLY CIDPYPVEPP CYDFANPSKV IRYPIYEHCR 120
  121 PCLTSVKPPS YTPSVEHYTV VSMKMEKLSP FENASSRLWN NFILQINSTQ INFYSIDDSL 180
  181 TRHIKNYRGG DMFDHSHHSK TASDRHHSAR SLLNAFTTKS TYQFDKYDKE RICGEIARDE 240
  241 HKFLSDERLF KSYSLQCAKV GLPIDYSSRD FVLRMRCEGQ QFLVQFSHVD ELIYWAMYLN 300
  301 MGISLSLDLE LREMPTYRSV PRRRHPRARR FKQHNKNKNK NKSRQNSDRN DSRSHSLLLR 360
  361 RSH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [364-437]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSSVVTKVAT GNERPTNKSR SRSLSLLPPS VSDASHDSNG PNDSGSLAGE SSQTDFCGLF  60
   61 TSKLRNFFKT DSSS

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 7.32
Match: 1l8mA
Description: No description for 1l8mA was found.

Predicted Domain #3
Region A:
Residues: [438-515]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RKNSNMDIGQ KMRSKELNSV QEEIDDNGST TNTNTSVLSS TFSPTAHSVL TAQTSIHENF  60
   61 RSRSNSNPID PLRCDRSV

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 7.32
Match: 1l8mA
Description: No description for 1l8mA was found.

Predicted Domain #4
Region A:
Residues: [516-585]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LKINNFEPVY EGTGRSTISN SAERTNREEK LNRGNEDVNG DEDDDEDEDD ANYEEDDEDG  60
   61 YVEDDDINRL 

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 7.32
Match: 1l8mA
Description: No description for 1l8mA was found.

Predicted Domain #5
Region A:
Residues: [586-679]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VYLDERESRY ENADVEYGTI FSTKSFSVTG CLNHDFPKKL SLKCGNKNQS SNDSKWAPAT  60
   61 QLVSRKRYIK DSLRCIKPLT EDHPWVGKII FKPA

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 7.32
Match: 1l8mA
Description: No description for 1l8mA was found.

Predicted Domain #6
Region A:
Residues: [680-740]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPPAFETNNP PIRVYSGEDS TDLMHVKNHY LKPYIVGSCG FLKTGSKLFH FYDRTNDLTN  60
   61 L

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle