| Protein: | CPT1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 386 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CPT1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [3..386] | [24..407] |
|
|
1.0E-99 | [2..383] | [47..409] |
|
|
1.0E-95 | [3..383] | [9..387] |
|
|
2.0E-95 | [3..383] | [9..387] |
|
|
2.0E-94 | [2..385] | [16..380] |
|
|
3.0E-93 | [3..383] | [9..387] |
|
|
1.0E-92 | [3..383] | [9..387] |
|
Region A: Residues: [1-68] |
1 11 21 31 41 51
| | | | | |
1 MRIARIVKHL YQSDDRSFLS NHVLRPFWRK FATIFPLWMA PNLVTLLGFC FIIFNVLTTL 60
61 YYDPYFDQ
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [69-246] |
1 11 21 31 41 51
| | | | | |
1 ESPRWTYFSY AIGLFLYQTF DACDGMHARR TGQQGPLGEL FDHCIDSINT TLSMIPVCSM 60
61 TGMGYTYMTI FSQFAILCSF YLSTWEEYHT HKLYLAEFCG PVEGIIVLCI SFIAVGIYGP 120
121 QTIWHTKVAQ FSWQDFVFDV ETVHLMYAFC TGALIFNIVT AHTNVVRYYE SQSTKSAT
|
| Detection Method: | |
| Confidence: | 26.853872 |
| Match: | PF01066 |
| Description: | CDP-alcohol phosphatidyltransferase |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [247-386] |
1 11 21 31 41 51
| | | | | |
1 PSKTAENISK AVNGLLPFFA YFSSIFTLVL IQPSFISLAL ILSIGFSVAF VVGRMIIAHL 60
61 TMQPFPMVNF PFLIPTIQLV LYAFMVYVLD YQKGSIVSAL VWMGLGLTLA IHGMFINDII 120
121 YDITTFLDIY ALSIKHPKEI
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
