| Protein: | YAF9 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 226 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YAF9.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-84 | [1..226] | [1..226] |
|
|
2.0E-67 | [1..222] | [1..212] |
|
|
3.0E-66 | [3..224] | [6..205] |
|
|
3.0E-65 | [3..224] | [10..209] |
|
|
1.0E-64 | [3..224] | [10..209] |
|
|
5.0E-62 | [4..223] | [7..212] |
|
|
1.0E-60 | [7..220] | [37..258] |
|
|
8.0E-55 | [4..216] | [3..195] |
|
Region A: Residues: [1-123] |
1 11 21 31 41 51
| | | | | |
1 MAPTISKRIK TLSVSRPIIY GNTAKKMGSV KPPNAPAEHT HLWTIFVRGP QNEDISYFIK 60
61 KVVFKLHDTY PNPVRSIEAP PFELTETGWG EFDINIKVYF VEEANEKVLN FYHRLRLHPY 120
121 ANP
|
| Detection Method: |  |
| Confidence: | 66.920819 |
| Match: | PF03366 |
| Description: | YEATS family |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.408 | 0.296 | Swr1 complex | b.1.2 | Fibronectin type III |
| View | Download | 0.335 | 0.051 | Swr1 complex | b.1.10 | Clathrin adaptor appendage domain |
| View | Download | 0.296 | 0.028 | Swr1 complex | b.61.1 | Avidin/streptavidin |
| View | Download | 0.311 | N/A | N/A | d.105.1 | Clathrin adaptor appendage, alpha and beta chain-specific domain |
| View | Download | 0.300 | N/A | N/A | b.1.5 | Transglutaminase, two C-terminal domains |
|
Region A: Residues: [124-226] |
1 11 21 31 41 51
| | | | | |
1 VPNSDNGNEQ NTTDHNSKDA EVSSVYFDEI VFNEPNEEFF KILMSRPGNL LPSNKTDDCV 60
61 YSKQLEQEEI DRIEIGIEKV DKEIDELKQK LENLVKQEAI NGS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.301 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.301 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.313 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.313 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.556 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.556 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.423 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.423 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.593 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.593 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.293 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.285 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.282 | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.280 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.256 | d.198.1 | Type III secretory system chaperone |
| View | Download | 0.244 | a.118.1 | ARM repeat |
| View | Download | 0.242 | a.4.12 | TrpR-like |
| View | Download | 0.219 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.215 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.214 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.210 | a.130.1 | Chorismate mutase II |
| View | Download | 0.202 | a.118.8 | TPR-like |
