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View Structure Prediction Details

Protein: RPS7B
Organism: Saccharomyces cerevisiae
Length: 190 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPS7B.

Description E-value Query
Range		 Subject
Range
gi|55594424 - gi|55594424|ref|XP_515279.1| PREDICTED: similar to 40S ribosomal protein S7 (S8) [Pan troglodytes]
RPS7 - ribosomal protein S7
RS7_BOVIN - 40S ribosomal protein S7 OS=Bos taurus GN=RPS7 PE=2 SV=1
RS7_RAT - 40S ribosomal protein S7 OS=Rattus norvegicus GN=Rps7 PE=1 SV=1
gi|126303250 - gi|126303250|ref|XP_001372205.1| PREDICTED: similar to ribosomal protein S7 [Monodelphis domestica]
ENSOCUP000000073... - pep:novel scaffold:oryCun2:GL018721:247664:252773:1 gene:ENSOCUG00000008507 transcript:ENSOCUT000000...
RS7_FELCA - 40S ribosomal protein S7 OS=Felis catus GN=RPS7 PE=2 SV=1
ENSCJAT000000435... - null, null, null
RS7_MOUSE - 40S ribosomal protein S7 OS=Mus musculus GN=Rps7 PE=2 SV=1
gi|57098089 - gi|57098089|ref|XP_532859.1| PREDICTED: similar to 40S ribosomal protein S7 (S8) isoform 1 [Canis fa...
gi|60655919, gi|... - gi|60655919|gb|AAX32523.1| ribosomal protein S7 [synthetic construct], gi|208967334|dbj|BAG73681.1| ...
ENSMMUT000000166... - null, null
gi|149727784 - gi|149727784|ref|XP_001503681.1| PREDICTED: similar to ribosomal protein S7 [Equus caballus]
gi|297172 - gi|297172|emb|CAA37457.1| ribosomal protein S7 [Rattus rattus]
 1.0E-88 [1..186] [1..190]
RS7_XENLA - 40S ribosomal protein S7 OS=Xenopus laevis GN=rps7 PE=2 SV=2
 5.0E-87 [1..186] [1..190]
RS7_ICTPU - 40S ribosomal protein S7 OS=Ictalurus punctatus GN=rps7 PE=2 SV=1
 1.0E-86 [1..186] [1..190]
RS7_TAKRU - 40S ribosomal protein S7 OS=Takifugu rubripes GN=rps7 PE=3 SV=1
 6.0E-86 [1..186] [1..190]
RS7_BRAOL - 40S ribosomal protein S7 OS=Brassica oleracea GN=RPS7 PE=2 SV=1
 8.0E-77 [1..188] [1..189]
RS73_ARATH - 40S ribosomal protein S7-3 OS=Arabidopsis thaliana GN=RPS7C PE=1 SV=2
 3.0E-76 [1..188] [1..189]
rps7 - 40S ribosomal protein S7
RS7_SCHPO - 40S ribosomal protein S7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rps7 PE=1 SV=2
 5.0E-76 [3..189] [2..191]

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Predicted Domain #1
Region A:
Residues: [1-190] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSVQSKILS QAPSELELQV AKTFIDLESS SPELKADLRP LQIKSIREID VTGGKKALVL  60
   61 FVPVPALSAY HKVQTKLTRE LEKKFPDRHV IFLAERRILP KPSRTSRQVQ KRPRSRTLTA 120
  121 VHDKVLEDMV FPTEIVGKRV RYLVGGNKIQ KVLLDSKDVQ QIDYKLESFQ AVYNKLTGKQ 180
  181 IVFEIPSQTN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 124.657577
Match: PF01251
Description: Ribosomal protein S7e

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle