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View Structure Prediction Details

Protein: YNL086W
Organism: Saccharomyces cerevisiae
Length: 102 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YNL086W.

Description E-value Query
Range
Subject
Range
gi|71064114 - gi|71064114|gb|AAZ22522.1| Ynl086wp [Saccharomyces cerevisiae]
SNAPN_YEAS2 - Biogenesis of lysosome-related organelles complex 1 subunit SNN1 OS=Saccharomyces cerevisiae (strain...
201.0 [0..1] [102..1]
gi|49527259 - gi|49527259|emb|CAG60899.1| unnamed protein product [Candida glabrata]
SNAPN_CANGA - Biogenesis of lysosome-related organelles complex 1 subunit SNN1 OS=Candida glabrata (strain ATCC 20...
92.0 [0..5] [100..2]
gi|49641953 - gi|49641953|emb|CAH01671.1| KLLA0C13882p [Kluyveromyces lactis]
SNAPN_KLULA - Biogenesis of lysosome-related organelles complex 1 subunit SNN1 OS=Kluyveromyces lactis (strain ATC...
79.0 [0..4] [96..4]
SNAPN_ASHGO - Biogenesis of lysosome-related organelles complex 1 subunit SNN1 OS=Ashbya gossypii (strain ATCC 108...
gi|44984081, gi|... - gi|45191013|ref|NP_985267.1| AER412Wp [Ashbya gossypii ATCC 10895], gi|44984081|gb|AAS53091.1| AER41...
75.0 [0..12] [100..10]
gi|50427681, gi|... - gi|50427681|ref|XP_462453.1| hypothetical protein DEHA0G22253g [Debaryomyces hansenii CBS767], gi|49...
53.0 [0..11] [101..28]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGDSISADG TGVHPVELSV YSVLSTDLDG LYQSINELRE SQALLILMLR KVRDKLRREG  60
   61 QVLYDPEPFK PTMDKLADLS ARVRILSQRY EELQGNARAL NN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.955 a.7.12 Description not found.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle