Protein: | END3 |
Organism: | Saccharomyces cerevisiae |
Length: | 349 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for END3.
Description | E-value | Query Range |
Subject Range |
|
4.0E-55 | [1..349] | [1..349] |
|
5.0E-54 | [3..339] | [5..351] |
|
2.0E-53 | [2..348] | [121..526] |
|
4.0E-52 | [3..339] | [5..351] |
|
1.0E-51 | [3..345] | [5..353] |
|
2.0E-50 | [38..283] | [283..539] |
|
5.0E-50 | [43..313] | [11..294] |
Region A: Residues: [1-98] |
1 11 21 31 41 51 | | | | | | 1 MPKLEQFEIK KYWQIFSGLK PIENKVNHDQ VLPILYNSKL DSSVLNKIWF LADIDDDDNL 60 61 DFEEFVICMR LIFDMVNKNI SSVPDELPDW LIPGSKVN |
Detection Method: | |
Confidence: | 128.156545 |
Match: | 1eh2__ |
Description: | Eps15 |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [99-180] |
1 11 21 31 41 51 | | | | | | 1 LIKERKKRKQ IENADLPPKK EIKVDWYMSP DDLNQYEKIY NSCAKLTDGT ITFNELSTKL 60 61 STKFFNISKT DLNKVWSLIN PQ |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [181-274] |
1 11 21 31 41 51 | | | | | | 1 NLPSIDRDPT FYFIHCLRQR NDLGAEIPAS LPNSLAEVCN KKQLSYDLRS SQPPTKRKEE 60 61 ANEVDNLRDN GQNSSSDSSG SNVLSNEDSI KQKY |
Detection Method: | |
Confidence: | 38.221849 |
Match: | 1iq5A_ |
Description: | Calmodulin |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [275-349] |
1 11 21 31 41 51 | | | | | | 1 ASLTDDQVAN MREQLEGLLN YKKSEKTQGG SKLSKRINIR SITDDLDNIE QQVEVLENYL 60 61 NNKRHELQAL QAEIN |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.924 | 0.038 | protein binding, bridging | a.2.7 | tRNA-binding arm |