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View Structure Prediction Details

Protein: MLF3
Organism: Saccharomyces cerevisiae
Length: 452 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MLF3.

Description E-value Query
Range
Subject
Range
gi|71064082 - gi|71064082|gb|AAZ22491.1| Vhs2p [Saccharomyces cerevisiae]
244.0 [0..5] [254..18]
gi|49525486 - gi|49525486|emb|CAG59103.1| unnamed protein product [Candida glabrata]
gi|49525486, gi|... - gi|50287499|ref|XP_446179.1| unnamed protein product [Candida glabrata], gi|49525486|emb|CAG59103.1|...
109.0 [0..6] [309..10]
gi|49643436 - gi|49643436|emb|CAG99388.1| KLLA0E07811p [Kluyveromyces lactis]
gi|49643436, gi|... - gi|50308597|ref|XP_454301.1| unnamed protein product [Kluyveromyces lactis], gi|49643436|emb|CAG9938...
101.0 [0..10] [357..30]
gi|44984100 - gi|44984100|gb|AAS53110.1| AER431Cp [Ashbya gossypii ATCC 10895]
gi|45191032, gi|... - gi|45191032|ref|NP_985286.1| AER431Cp [Ashbya gossypii ATCC 10895], gi|44984100|gb|AAS53110.1| AER43...
83.0 [0..117] [440..77]
gi|50408430, gi|... - gi|50408430|ref|XP_456779.1| hypothetical protein DEHA0A10604g [Debaryomyces hansenii CBS767], gi|49...
55.0 [0..78] [165..88]

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Predicted Domain #1
Region A:
Residues: [1-254]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCVYKSNSNN SNPSFIFERT VQEASSNDLF LQPPVSASNT SHSSRSNSFY NLQTISPIPI  60
   61 SGSEVRTPSL RKNSNNVSSP LDNVIPTSRS ASNSTTSSLA HQEYILNPIC NMQNHHHRRR 120
  121 TLENSVAPAL DASCSIVNDE NTDLSDVDMV YSRRPSSAVS LNMALLARTN SATLPSSESS 180
  181 PASPDLKLSR SHSHSAATRP TLNNINNTGM TTTTSNGEPN SRILRFYSYV DMLNDEKLAQ 240
  241 ANNTPTSRPP MKSQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [255-452]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AYSCPFILKR SPPQAYSSSS ATTTFSNPFI KTTELPATSP YVSPQQSARQ YSNNANNNAK  60
   61 SPKNRSSSIL FQRQSILSNV DPVANMHKNP KFQIESSDSE EEDLTMDMLD PSFPLSSSLR 120
  121 SSANLASNPE LATQTPLSTS SSYTAIGKPM PLSTDPSYVS SSNTLSSEHE LRVEKVSEVL 180
  181 KKKVSNGGFS TEFNSCDT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle