| Protein: | BOP3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 396 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BOP3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..396] | [1..396] |
|
|
1.0E-4 | [126..240] | [416..538] |
|
|
0.002 | [100..278] | [1488..1695] |
|
Region A: Residues: [1-125] |
1 11 21 31 41 51
| | | | | |
1 MSTFNSYSQP KESNDNSHNN VNKSKSLLDI IFGTNVSEWA FSENALMKAM DLKIEQEKTK 60
61 QQYYKLENLN RSIELFKLAS SSGLPINQIH KLFNTDHGVP ASSPMKAGGN QPHNNTEGTQ 120
121 SSENL
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.215 | a.1.1 | Globin-like |
| View | Download | 0.466 | a.77.1 | DEATH domain |
| View | Download | 0.466 | a.77.1 | DEATH domain |
| View | Download | 0.317 | f.1.5 | Exotoxin A, middle domain |
| View | Download | 0.317 | f.1.5 | Exotoxin A, middle domain |
| View | Download | 0.215 | a.1.1 | Globin-like |
|
Region A: Residues: [126-251] |
1 11 21 31 41 51
| | | | | |
1 PRLNGSMKSL KPLNMNTVSP TPMSRQPSPY KFPASSSTGG ISHSTVTNVQ RRANSPARIG 60
61 ASAVAALNDN ISIKEEDVAR RIPSGTKSQE SPLNKKPTSL HSRNLSLPIG KFTNPNIPST 120
121 MTSILS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [252-396] |
1 11 21 31 41 51
| | | | | |
1 FNRDQQQPLS QPLPPPPQQQ QDLHTHNLHT IPRKPGMVQK KHRRARSTSS FGVIDLSIID 60
61 EAKEKQVQRS PSPIHSNVSV ALTSHDKPIE SNMKEQPNML QSVREGRQVH DDLDDRTCSE 120
121 SSSRNESPVR TITKDNSVGK ILNST
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
