YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: GPI15
Organism: Saccharomyces cerevisiae
Length: 212 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GPI15.

Description E-value Query
Range
Subject
Range
gi|32415485, gi|... - gi|32415485|ref|XP_328222.1| hypothetical protein [Neurospora crassa], gi|28918293|gb|EAA27970.1| pr...
gi|85083862 - gi|85083862|ref|XP_957206.1| hypothetical protein NCU01783 [Neurospora crassa OR74A]
2.0E-38 [94..197] [104..208]
gpi15 - pig-H
GPI15_SCHPO - Phosphatidylinositol N-acetylglucosaminyltransferase subunit gpi15 OS=Schizosaccharomyces pombe (str...
0.003 [94..200] [39..139]
ENSPTRT00000011843 - null
gi|60655901, gi|... - gi|60655901|gb|AAX32514.1| phosphatidylinositol glycan class H [synthetic construct], gi|60655899|gb...
PIGH - phosphatidylinositol glycan anchor biosynthesis, class H
0.005 [92..187] [60..142]

Back

Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISKEYEFGK TSILNRKKYT LVIDEDKNGN FIRFTVLPVS NRKFKKVKQN GRVEINMGIQ  60
   61 YHQIVLILLL NILFYVICLR SRFLEHINRT F

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [92-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EVTIARSFQI LIIMGLFALG TIILVRGPSV ETVTIFKESG LQLSRVKGMV IFPQQWNRKF  60
   61 FEQVEFISNE RIIDVVINEG FCRGFRVIFY LAAIVRKSST LKLLFPVCIQ ANLRLFLTST 120
  121 I

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle